RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 VPS37AQ8NEZ2 397 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 EAF2Q96CJ1 260 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 COPS4Q9BT78 406 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 KLHL1Q9NR64 748 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ATP8A1Q9Y2Q0 1164 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 MRPL11Q9Y3B7 192 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 CDK5RAP2Q96SN8 1893 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 CASTOR2A6NHX0 329 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 STX11O75558 287 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 BMP15O95972 392 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 RALAP11233 206 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 TPH1P17752 444 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 POLR2BP30876 1174 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 TWF1Q12792 350 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 PAK1Q13153 545 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 RC3H1Q5TC82 1133 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 GRAMD4Q6IC98 578 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 LRRC8CQ8TDW0 803 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 MTA3Q9BTC8 594 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 TOR4AQ9NXH8 423 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 NAGPAQ9UK23 515 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 STON1Q9Y6Q2 735 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 TMEM120BA0PK00 339 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 E7EWF7 191 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ZC3H11AO75152 810 aaKnown RBP eCLIP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 KCNJ5P48544 419 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 BMP2KLQ5H9B9 411 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 HMBOX1Q6NT76 420 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 DNAJC14Q6Y2X3 702 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 EFCAB3Q8N7B9 438 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 SLC30A5Q8TAD4 765 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 GTF3C2Q8WUA4 911 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 USB1Q9BQ65 265 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 TOPORSQ9NS56 1045 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 HPCAL4Q9UM19 191 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 JRKLQ9Y4A0 524 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 FAM25AB3EWG3 89 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 FAM25CB3EWG5 89 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 FAM25GB3EWG6 89 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ERVK-10P10266 1014 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 TMEM63BQ5T3F8 832 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 CRTC1Q6UUV9 634 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 TADA2BQ86TJ2 420 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 C19orf44Q9H6X5 657 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 NUP205Q92621 2012 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 KRT87PA6NCN2 255 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 AKAP10O43572 662 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF806P0C7X5 589 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 NDEL1Q9GZM8 345 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 DNAJC16Q9Y2G8 782 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 SYCP2Q9BX26 1530 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 PIPSLA2A3N6 862 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 STAT1P42224 750 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 NPEPPSP55786 919 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 GALNTL6Q49A17 601 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 DET1Q7L5Y6 550 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 SFR1Q86XK3 245 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 GABPB2Q8TAK5 448 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 PIGBQ92521 554 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 GPN3Q9UHW5 284 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 NOVA2Q9UNW9 492 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 PCDHB7Q9Y5E2 793 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 HSMCR30P0CW71 290 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 FDPSP14324 419 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 NUDT2P50583 147 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 NFKB2Q00653 900 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 KLC3Q6P597 504 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 PARGQ86W56 976 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 NDUFAF2Q8N183 169 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF483Q8TF39 744 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 COL26A1Q96A83 441 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ADPRHL2Q9NX46 363 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 RAD50Q92878 1312 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 RASSF9O75901 435 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 PFKFB1P16118 471 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 GUCY2DQ02846 1103 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ANKRD20A4Q4UJ75 823 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ANKRD20A8PQ5CZ79 823 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ANKRD20A2Q5SQ80 823 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ANKRD20A1Q5TYW2 823 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 RSBN1Q5VWQ0 802 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 PLBD2Q8NHP8 589 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 KCNN1Q92952 543 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 RUNDC3BQ96NL0 473 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 CYP2S1Q96SQ9 504 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 COPS7BQ9H9Q2 264 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 PNPLA8Q9NP80 782 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 TARSL2A2RTX5 802 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 IFNA16P05015 189 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ZSCAN5DPP0CG00 497 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 EXOSC10Q01780 885 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ALDH1L2Q3SY69 923 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 RDH11Q8TC12 318 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 SEMA4DQ92854 862 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 SATB2Q9UPW6 733 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 LYVE1Q9Y5Y7 322 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ESYT3A0FGR9 886 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 HSPA6P17066 643 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ACOT2P49753 483 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 HNRNPH2P55795 449 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms