RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 GID8Q9NWU2 228 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 ANKFY1Q9P2R3 1169 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 PCDHA4Q9UN74 947 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 ZNF536O15090 1300 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 NOTOA8MTQ0 251 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 TOM1O60784 492 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 TNFAIP8O95379 198 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 H2AFZP0C0S5 128 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 C6orf222P0C671 652 aaPredicted RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 HSPA6P17066 643 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 CHRNB2P17787 502 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 TCEA1P23193 301 aaKnown RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 EPS15P42566 896 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 MXI1P50539 228 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 CASP7P55210 303 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 NUP107P57740 925 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 ASIC1P78348 528 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 LRRC63Q05C16 580 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 SCARF1Q14162 830 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 CTTNQ14247 550 aaKnown RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 WTAPQ15007 396 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 PPP2R5BQ15173 497 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 RASA2Q15283 850 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 KCNJ8Q15842 424 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 MAPK6Q16659 721 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 RWDD4Q6NW29 188 aaKnown RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 H2AFVQ71UI9 128 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 VPS36Q86VN1 386 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 ESX1Q8N693 406 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 RBM15BQ8NDT2 890 aaKnown RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 PLEKHA8Q96JA3 519 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 GPR101Q96P66 508 aaPredicted RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 RANBP9Q96S59 729 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 PLIN2Q99541 437 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 PLVAPQ9BX97 442 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 NINJ2Q9NZG7 142 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 NCKIPSDQ9NZQ3 722 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 DCTN4Q9UJW0 460 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 RBMX2Q9Y388 322 aaKnown RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 ACEP12821 1306 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 MYOCOSA0A1B0GUC4 107 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 UNCXA6NJT0 531 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 UBAP1LF5GYI3 381 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 KMOO15229 486 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 DNAJA2O60884 412 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 SULT1C4O75897 302 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 CAMTA2O94983 1202 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 APOEP02649 317 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 EEF2P13639 858 aaKnown RBP10.05□□□□□ -0.8
SIX4-202ENST00000554079 ACADSBP45954 432 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 CPA2P48052 419 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 ALDH3B2P48448 385 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 GPC3P51654 580 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 CTAG1AP78358 180 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 RASGRF1Q13972 1273 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 SEPT6Q14141 434 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 TMED2Q15363 201 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 CYP1B1Q16678 543 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 C1orf146Q5VVC0 180 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 SIGIRRQ6IA17 410 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 DPY19L2P1Q6NXN4 242 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 AADACL2Q6P093 401 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 CNNM4Q6P4Q7 775 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 ISLR2Q6UXK2 745 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 PRUNE1Q86TP1 453 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 TTC7BQ86TV6 843 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 TTC30AQ86WT1 665 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 SLC25A41Q8N5S1 370 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 CPSF7Q8N684 471 aaKnown RBP10.05□□□□□ -0.8
SIX4-202ENST00000554079 SHKBP1Q8TBC3 707 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 ALG3Q92685 438 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 USP6NLQ92738 828 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 ZNF496Q96IT1 587 aaPredicted RBP10.05□□□□□ -0.8
SIX4-202ENST00000554079 PRPF18Q99633 342 aaKnown RBP10.05□□□□□ -0.8
SIX4-202ENST00000554079 RTFDC1Q9BY42 306 aaPredicted RBP10.05□□□□□ -0.8
SIX4-202ENST00000554079 EHD1Q9H4M9 534 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 SIAEQ9HAT2 523 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 KCNK13Q9HB14 408 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 HOXC10Q9NYD6 342 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 ERVK-11Q9UQG0 969 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 IVNS1ABPQ9Y6Y0 642 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 ADAMTS7Q9UKP4 1686 aa10.05□□□□□ -0.8
SIX4-202ENST00000554079 hCG_1642624A0A1W2PR95 340 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 A0A1W2PRG0 241 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 B2RBV5 119 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 ADAMTS3O15072 1205 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 INHBBP09529 407 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 THRAP10827 490 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 ANXA13P27216 316 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 IL15P40933 162 aaPredicted RBP10.04□□□□□ -0.8
SIX4-202ENST00000554079 UBA7P41226 1012 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 ZAP70P43403 619 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 TUFMP49411 452 aaKnown RBP10.04□□□□□ -0.8
SIX4-202ENST00000554079 NR1H3Q13133 447 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 DLGAP5Q15398 846 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 SF3B4Q15427 424 aaKnown RBP eCLIP10.04□□□□□ -0.8
SIX4-202ENST00000554079 ALX1Q15699 326 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 CNGA3Q16281 694 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 OGFRL1Q5TC84 451 aaPredicted RBP10.04□□□□□ -0.8
SIX4-202ENST00000554079 NANOGP8Q6NSW7 305 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms