RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 FBXW11Q9UKB1 542 aa24.57■■□□□ 1.52
TDP1-206ENST00000553569 PPP1R3GB7ZBB8 358 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 CETN3O15182 167 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 MAPK13O15264 365 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 TBC1D4O60343 1298 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 PHACTR2O75167 634 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 WEE2P0C1S8 567 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 KRT13P13646 458 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 LRRC63Q05C16 580 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 MYO1EQ12965 1108 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 BIRC3Q13489 604 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 SLC8B1Q6J4K2 584 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 METTL23Q86XA0 190 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 FEZF2Q8TBJ5 459 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 TMC2Q8TDI7 906 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 ADAMTS19Q8TE59 1207 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 NELFBQ8WX92 580 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 HPDLQ96IR7 371 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 DPP7Q9UHL4 492 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 DSEQ9UL01 958 aa24.56■■□□□ 1.52
TDP1-206ENST00000553569 RFPL2O75678 378 aa24.55■■□□□ 1.52
TDP1-206ENST00000553569 CLSTN1O94985 981 aa24.55■■□□□ 1.52
TDP1-206ENST00000553569 OAZ2O95190 189 aa24.55■■□□□ 1.52
TDP1-206ENST00000553569 TRIM49P0CI25 452 aa24.55■■□□□ 1.52
TDP1-206ENST00000553569 TRIM49CP0CI26 452 aa24.55■■□□□ 1.52
TDP1-206ENST00000553569 EPB41P11171 864 aaKnown RBP24.55■■□□□ 1.52
TDP1-206ENST00000553569 CPB1P15086 417 aa24.55■■□□□ 1.52
TDP1-206ENST00000553569 VAMP7P51809 220 aa24.55■■□□□ 1.52
TDP1-206ENST00000553569 LIN9Q5TKA1 542 aa24.55■■□□□ 1.52
TDP1-206ENST00000553569 TDRD10Q5VZ19 366 aaKnown RBP24.55■■□□□ 1.52
TDP1-206ENST00000553569 WSCD1Q658N2 575 aa24.55■■□□□ 1.52
TDP1-206ENST00000553569 CES5AQ6NT32 575 aa24.55■■□□□ 1.52
TDP1-206ENST00000553569 INTS8Q75QN2 995 aaKnown RBP24.55■■□□□ 1.52
TDP1-206ENST00000553569 NECAB3Q96P71 396 aaPredicted RBP24.55■■□□□ 1.52
TDP1-206ENST00000553569 PLEKHA4Q9H4M7 779 aa24.55■■□□□ 1.52
TDP1-206ENST00000553569 SNX9Q9Y5X1 595 aa24.55■■□□□ 1.52
TDP1-206ENST00000553569 WDR27A2RRH5 827 aa24.54■■□□□ 1.52
TDP1-206ENST00000553569 C1RP00736 705 aa24.54■■□□□ 1.52
TDP1-206ENST00000553569 CYP11A1P05108 521 aa24.54■■□□□ 1.52
TDP1-206ENST00000553569 OR4Q2P0C623 313 aa24.54■■□□□ 1.52
TDP1-206ENST00000553569 FKBP3Q00688 224 aaKnown RBP24.54■■□□□ 1.52
TDP1-206ENST00000553569 ITIH3Q06033 890 aa24.54■■□□□ 1.52
TDP1-206ENST00000553569 TRPC3Q13507 836 aa24.54■■□□□ 1.52
TDP1-206ENST00000553569 SMAD2Q15796 467 aaKnown RBP24.54■■□□□ 1.52
TDP1-206ENST00000553569 ADAM7Q9H2U9 754 aa24.54■■□□□ 1.52
TDP1-206ENST00000553569 MMRN2Q9H8L6 949 aa24.54■■□□□ 1.52
TDP1-206ENST00000553569 C2orf16Q68DN1 1984 aa24.54■■□□□ 1.52
TDP1-206ENST00000553569 HUS1O60921 280 aa24.53■■□□□ 1.52
TDP1-206ENST00000553569 CST3P01034 146 aaPredicted RBP24.53■■□□□ 1.52
TDP1-206ENST00000553569 C8AP07357 584 aa24.53■■□□□ 1.52
TDP1-206ENST00000553569 AP3M2P53677 418 aa24.53■■□□□ 1.52
TDP1-206ENST00000553569 STX17P56962 302 aa24.53■■□□□ 1.52
TDP1-206ENST00000553569 CLDN10P78369 228 aa24.53■■□□□ 1.52
TDP1-206ENST00000553569 PAK1Q13153 545 aa24.53■■□□□ 1.52
TDP1-206ENST00000553569 C1orf220Q5T0J3 134 aa24.53■■□□□ 1.52
TDP1-206ENST00000553569 HDAC7Q8WUI4 952 aa24.53■■□□□ 1.52
TDP1-206ENST00000553569 SUSD6Q92537 303 aa24.53■■□□□ 1.52
TDP1-206ENST00000553569 MKNK1Q9BUB5 465 aa24.53■■□□□ 1.52
TDP1-206ENST00000553569 L1RE1Q9UN81 338 aa24.53■■□□□ 1.52
TDP1-206ENST00000553569 OR6C75A6NL08 312 aa24.52■■□□□ 1.52
TDP1-206ENST00000553569 MYL6P60660 151 aa24.52■■□□□ 1.52
TDP1-206ENST00000553569 CBX2Q14781 532 aaPredicted RBP24.52■■□□□ 1.52
TDP1-206ENST00000553569 TTI2Q6NXR4 508 aa24.52■■□□□ 1.52
TDP1-206ENST00000553569 ZC3H3Q8IXZ2 948 aaKnown RBP24.52■■□□□ 1.52
TDP1-206ENST00000553569 PDCL2Q8N4E4 241 aa24.52■■□□□ 1.52
TDP1-206ENST00000553569 SLC7A14Q8TBB6 771 aa24.52■■□□□ 1.52
TDP1-206ENST00000553569 TMEM209Q96SK2 561 aa24.52■■□□□ 1.52
TDP1-206ENST00000553569 UHRF1Q96T88 793 aaPredicted RBP24.52■■□□□ 1.52
TDP1-206ENST00000553569 GDAP2Q9NXN4 497 aa24.52■■□□□ 1.52
TDP1-206ENST00000553569 CCDC195A0A1B0GUA6 201 aa24.51■■□□□ 1.51
TDP1-206ENST00000553569 BICDL2A1A5D9 508 aa24.51■■□□□ 1.51
TDP1-206ENST00000553569 SLC16A3O15427 465 aaKnown RBP24.51■■□□□ 1.51
TDP1-206ENST00000553569 ZMYND10O75800 440 aa24.51■■□□□ 1.51
TDP1-206ENST00000553569 C4BPAP04003 597 aaKnown RBP24.51■■□□□ 1.51
TDP1-206ENST00000553569 PPM1LQ5SGD2 360 aa24.51■■□□□ 1.51
TDP1-206ENST00000553569 THEM5Q8N1Q8 247 aa24.51■■□□□ 1.51
TDP1-206ENST00000553569 OR10T2Q8NGX3 314 aa24.51■■□□□ 1.51
TDP1-206ENST00000553569 ZNF461Q8TAF7 563 aa24.51■■□□□ 1.51
TDP1-206ENST00000553569 RIPOR3Q96MK2 946 aa24.51■■□□□ 1.51
TDP1-206ENST00000553569 PGLYRP2Q96PD5 576 aa24.51■■□□□ 1.51
TDP1-206ENST00000553569 DUSP9Q99956 384 aaKnown RBP24.51■■□□□ 1.51
TDP1-206ENST00000553569 OXCT2Q9BYC2 517 aaPredicted RBP24.51■■□□□ 1.51
TDP1-206ENST00000553569 ELF1P32519 619 aa24.5■■□□□ 1.51
TDP1-206ENST00000553569 MTHFRP42898 656 aa24.5■■□□□ 1.51
TDP1-206ENST00000553569 GCLMP48507 274 aa24.5■■□□□ 1.51
TDP1-206ENST00000553569 NCOA4Q13772 614 aa24.5■■□□□ 1.51
TDP1-206ENST00000553569 ZACNQ401N2 412 aa24.5■■□□□ 1.51
TDP1-206ENST00000553569 RNF19BQ6ZMZ0 732 aa24.5■■□□□ 1.51
TDP1-206ENST00000553569 GPR149Q86SP6 731 aa24.5■■□□□ 1.51
TDP1-206ENST00000553569 ADGRF2Q8IZF7 708 aa24.5■■□□□ 1.51
TDP1-206ENST00000553569 TOP6BLQ8N6T0 577 aa24.5■■□□□ 1.51
TDP1-206ENST00000553569 CMASQ8NFW8 434 aaPredicted RBP24.5■■□□□ 1.51
TDP1-206ENST00000553569 SMG7Q92540 1137 aaKnown RBP24.5■■□□□ 1.51
TDP1-206ENST00000553569 MMS19Q96T76 1030 aa24.5■■□□□ 1.51
TDP1-206ENST00000553569 RTP3Q9BQQ7 232 aa24.5■■□□□ 1.51
TDP1-206ENST00000553569 CYP4F11Q9HBI6 524 aa24.5■■□□□ 1.51
TDP1-206ENST00000553569 ZDHHC7Q9NXF8 308 aa24.5■■□□□ 1.51
TDP1-206ENST00000553569 PRRG1O14668 218 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 IKBKBO14920 756 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 ABLIM3O94929 683 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms