RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 HAPLN2Q9GZV7 340 aa13.71□□□□□ -0.21
SHMT2-205ENST00000553474 ASIC3Q9UHC3 531 aa13.71□□□□□ -0.21
SHMT2-205ENST00000553474 PTPRJQ12913 1337 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 LOC102724159A0A0B4J2E5 919 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 CXCL11O14625 94 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 SHBGP04278 402 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 ATF2P15336 505 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 IVDP26440 423 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 TMOD1P28289 359 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 SLC26A2P50443 739 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 YWHAEP62258 255 aaKnown RBP13.71□□□□□ -0.22
SHMT2-205ENST00000553474 PWP2Q15269 919 aaKnown RBP13.71□□□□□ -0.22
SHMT2-205ENST00000553474 SGSM1Q2NKQ1 1148 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 TREML2Q5T2D2 321 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 RCOR2Q8IZ40 523 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 CACNA2D3Q8IZS8 1091 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 FEZF2Q8TBJ5 459 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 OSBPL8Q9BZF1 889 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 AZI2Q9H6S1 392 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 ACTR5Q9H9F9 607 aaPredicted RBP13.71□□□□□ -0.22
SHMT2-205ENST00000553474 APOBEC3GQ9HC16 384 aaKnown RBP13.71□□□□□ -0.22
SHMT2-205ENST00000553474 ANKFY1Q9P2R3 1169 aa13.71□□□□□ -0.22
SHMT2-205ENST00000553474 FAM155AB1AL88 458 aaPredicted RBP13.7□□□□□ -0.22
SHMT2-205ENST00000553474 OGTO15294 1046 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 TLR3O15455 904 aaKnown RBP13.7□□□□□ -0.22
SHMT2-205ENST00000553474 MSCO60682 206 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 AOC2O75106 756 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 TTC4O95801 387 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 CETPP11597 493 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 EIF4BP23588 611 aaKnown RBP13.7□□□□□ -0.22
SHMT2-205ENST00000553474 PTPN7P35236 360 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 KCNJ1P48048 391 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 SEPT14Q6ZU15 432 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 ZNF365Q70YC5 407 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 PLPPR4Q7Z2D5 763 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 CPLX4Q7Z7G2 160 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 ZBTB8OSQ8IWT0 167 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 ZNF606Q8WXB4 792 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 HHIPL1Q96JK4 782 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 CABS1Q96KC9 395 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 SCLT1Q96NL6 688 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 PCYT2Q99447 389 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 CCDC113Q9H0I3 377 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 TELO2Q9Y4R8 837 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 NUB1Q9Y5A7 615 aa13.7□□□□□ -0.22
SHMT2-205ENST00000553474 DCDC2CA8MYV0 355 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 TP73O15350 636 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 ASAP2O43150 1006 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 FAM189A1O60320 539 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 LGR5O75473 907 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 SLC25A27O95847 323 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 CDH5P33151 784 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-205ENST00000553474 AUHQ13825 339 aaKnown RBP13.69□□□□□ -0.22
SHMT2-205ENST00000553474 PIGHQ14442 188 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-205ENST00000553474 MAPK6Q16659 721 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 DUOXA2Q1HG44 320 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 LMBRD2Q68DH5 695 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-205ENST00000553474 SPOPLQ6IQ16 392 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 CPNE8Q86YQ8 564 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 CCDC50Q8IVM0 306 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 MICALL1Q8N3F8 863 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 NIPA2Q8N8Q9 360 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 ANKS4BQ8N8V4 417 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 TMEM35BQ8NCS4 154 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 C1orf54Q8WWF1 131 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 BRI3BPQ8WY22 251 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 ZIC5Q96T25 663 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 C11orf70Q9BRQ4 267 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 NIF3L1Q9GZT8 377 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 SPATC1LQ9H0A9 340 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 CDC42EP4Q9H3Q1 356 aaKnown RBP13.69□□□□□ -0.22
SHMT2-205ENST00000553474 RABEP2Q9H5N1 569 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 CHST7Q9NS84 486 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 DDX20Q9UHI6 824 aaKnown RBP13.69□□□□□ -0.22
SHMT2-205ENST00000553474 STRIP2Q9ULQ0 834 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 PCDHGC3Q9UN70 934 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 NEU2Q9Y3R4 380 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 CEP83Q9Y592 693 aa13.69□□□□□ -0.22
SHMT2-205ENST00000553474 IGKV6-21A0A0C4DH24 114 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 TJP3O95049 919 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 RALAP11233 206 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 CHN1P15882 459 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 FGFR4P22455 802 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 TCF7P36402 384 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-205ENST00000553474 WNT7BP56706 349 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 CNTN2Q02246 1040 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 CCDC121Q6ZUS5 278 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 FASTKD5Q7L8L6 764 aaKnown RBP13.68□□□□□ -0.22
SHMT2-205ENST00000553474 RIBC1Q8N443 379 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-205ENST00000553474 OR5B17Q8NGF7 314 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 PRPF31Q8WWY3 499 aaKnown RBP13.68□□□□□ -0.22
SHMT2-205ENST00000553474 MS4A4AQ96JQ5 239 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 ZBTB45Q96K62 511 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-205ENST00000553474 ZNF317Q96PQ6 595 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-205ENST00000553474 ACO2Q99798 780 aaKnown RBP13.68□□□□□ -0.22
SHMT2-205ENST00000553474 CCDC77Q9BR77 488 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 NSRP1Q9H0G5 558 aaKnown RBP13.68□□□□□ -0.22
SHMT2-205ENST00000553474 EFCC1Q9HA90 598 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 INTS9Q9NV88 658 aaKnown RBP13.68□□□□□ -0.22
SHMT2-205ENST00000553474 DDX56Q9NY93 547 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms