RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 GULP1Q9UBP9 304 aa4.04□□□□□ -1.76
FOXN3-203ENST00000553353 SAP30BPQ9UHR5 308 aaKnown RBP4.04□□□□□ -1.76
FOXN3-203ENST00000553353 SERPINB13Q9UIV8 391 aa4.04□□□□□ -1.76
FOXN3-203ENST00000553353 ST6GALNAC2Q9UJ37 374 aa4.04□□□□□ -1.76
FOXN3-203ENST00000553353 BACE2Q9Y5Z0 518 aa4.04□□□□□ -1.76
FOXN3-203ENST00000553353 SLC12A7Q9Y666 1083 aa4.04□□□□□ -1.76
FOXN3-203ENST00000553353 PTPN13Q12923 2485 aa4.04□□□□□ -1.76
FOXN3-203ENST00000553353 WDR46O15213 610 aaKnown RBP4.03□□□□□ -1.76
FOXN3-203ENST00000553353 PPM1BO75688 479 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 CIAO1O76071 339 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 PARNO95453 639 aaKnown RBP4.03□□□□□ -1.76
FOXN3-203ENST00000553353 NTRK1P04629 796 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 CAPNS1P04632 268 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 ITGB1P05556 798 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 LDHCP07864 332 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 COPB2P35606 906 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 NDUFV1P49821 464 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 TIMM10P62072 90 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 DYNLL1P63167 89 aaKnown RBP4.03□□□□□ -1.76
FOXN3-203ENST00000553353 DMWDQ09019 674 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 CDSNQ15517 529 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 CERKLQ49MI3 558 aaPredicted RBP4.03□□□□□ -1.76
FOXN3-203ENST00000553353 DUSP28Q4G0W2 176 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 PRR31Q5SQ13 230 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 IQSEC1Q6DN90 963 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 UNQ6494/PRO21346Q6UXR6 183 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 LIMS2Q7Z4I7 341 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 ZBTB44Q8NCP5 570 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 KAT2BQ92831 832 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 ZNF689Q96CS4 500 aaPredicted RBP4.03□□□□□ -1.76
FOXN3-203ENST00000553353 RTP3Q9BQQ7 232 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 MTG1Q9BT17 334 aaPredicted RBP4.03□□□□□ -1.76
FOXN3-203ENST00000553353 MCMBPQ9BTE3 642 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 TEX13BQ9BXU2 312 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 KLC2Q9H0B6 622 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 USP44Q9H0E7 712 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 GNL3LQ9NVN8 582 aaKnown RBP4.03□□□□□ -1.76
FOXN3-203ENST00000553353 C9orf78Q9NZ63 289 aaPredicted RBP4.03□□□□□ -1.76
FOXN3-203ENST00000553353 SMCHD1A6NHR9 2005 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 MYH3P11055 1940 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 DSPP15924 2871 aaKnown RBP4.03□□□□□ -1.76
FOXN3-203ENST00000553353 TET1Q8NFU7 2136 aa4.03□□□□□ -1.76
FOXN3-203ENST00000553353 MYO7AQ13402 2215 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 PTPRSQ13332 1948 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 C7orf72A4D263 438 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 ZEB2O60315 1214 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 NRIP1P48552 1158 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 ITGA1P56199 1179 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 GSTO1P78417 241 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 AMPD2Q01433 879 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 MRPL58Q14197 206 aaKnown RBP4.02□□□□□ -1.77
FOXN3-203ENST00000553353 CCDC6Q16204 474 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 PTGISQ16647 500 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 GLIPR1L2Q4G1C9 344 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 ZNF618Q5T7W0 954 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 HEATR6Q6AI08 1181 aaKnown RBP4.02□□□□□ -1.77
FOXN3-203ENST00000553353 CD300LDQ6UXZ3 194 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 CPNE8Q86YQ8 564 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 FBXO16Q8IX29 292 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-203ENST00000553353 MYOCDQ8IZQ8 938 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 DNERQ8NFT8 737 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 RIN2Q8WYP3 895 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-203ENST00000553353 P2RX5Q93086 422 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 RCC1LQ96I51 464 aaKnown RBP4.02□□□□□ -1.77
FOXN3-203ENST00000553353 ZNF747Q9BV97 191 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 KLHL25Q9H0H3 589 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 VPS11Q9H270 941 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 EPC1Q9H2F5 836 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 POMKQ9H5K3 350 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 PRKRIP1Q9H875 184 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-203ENST00000553353 CD248Q9HCU0 757 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 PPP4R1LQ9P1A2 415 aa4.02□□□□□ -1.77
FOXN3-203ENST00000553353 CELSR3Q9NYQ7 3312 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 USP9XQ93008 2570 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-203ENST00000553353 NPEPPSL1A6NEC2 478 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 HAS3O00219 553 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 DDX3XO00571 662 aaKnown RBP eCLIP4.01□□□□□ -1.77
FOXN3-203ENST00000553353 APAF1O14727 1248 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 B4GALT3O60512 393 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 FUCA1P04066 466 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 HLA-DOAP06340 250 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 SP100P23497 879 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-203ENST00000553353 HOXC8P31273 242 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 CTNNB1P35222 781 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 KRTAP1-1Q07627 177 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 ICAM4Q14773 271 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 DUSP6Q16828 381 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 DPY19L1Q2PZI1 675 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 GNPTABQ3T906 1256 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 FBXW10Q5XX13 1052 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 SNRNP48Q6IEG0 339 aaKnown RBP4.01□□□□□ -1.77
FOXN3-203ENST00000553353 ADAT2Q7Z6V5 191 aaKnown RBP4.01□□□□□ -1.77
FOXN3-203ENST00000553353 CIR1Q86X95 450 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-203ENST00000553353 C1orf210Q8IVY1 113 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 ARHGEF39Q8N4T4 335 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 SPATA5Q8NB90 893 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 ADCY4Q8NFM4 1077 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 PLEKHO2Q8TD55 490 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 RASGRP4Q8TDF6 673 aa4.01□□□□□ -1.77
FOXN3-203ENST00000553353 SEC14L1Q92503 715 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms