RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 SRBD1Q8N5C6 995 aaKnown RBP9.63□□□□□ -0.87
PRKCH-203ENST00000552875 SNIP1Q8TAD8 396 aaKnown RBP9.63□□□□□ -0.87
PRKCH-203ENST00000552875 OTUD7AQ8TE49 926 aaPredicted RBP9.63□□□□□ -0.87
PRKCH-203ENST00000552875 RLN3Q8WXF3 142 aa9.63□□□□□ -0.87
PRKCH-203ENST00000552875 UROC1Q96N76 676 aa9.63□□□□□ -0.87
PRKCH-203ENST00000552875 LRRC3BQ96PB8 259 aa9.63□□□□□ -0.87
PRKCH-203ENST00000552875 GCNAQ96QF7 691 aa9.63□□□□□ -0.87
PRKCH-203ENST00000552875 CEP89Q96ST8 783 aa9.63□□□□□ -0.87
PRKCH-203ENST00000552875 RIT2Q99578 217 aa9.63□□□□□ -0.87
PRKCH-203ENST00000552875 FAM83CQ9BQN1 747 aa9.63□□□□□ -0.87
PRKCH-203ENST00000552875 SH2D3AQ9BRG2 576 aa9.63□□□□□ -0.87
PRKCH-203ENST00000552875 EBF3Q9H4W6 596 aa9.63□□□□□ -0.87
PRKCH-203ENST00000552875 PRDM16Q9HAZ2 1276 aa9.63□□□□□ -0.87
PRKCH-203ENST00000552875 PDCD11Q14690 1871 aaKnown RBP9.63□□□□□ -0.87
PRKCH-203ENST00000552875 BAZ2BQ9UIF8 2168 aaKnown RBP9.63□□□□□ -0.87
PRKCH-203ENST00000552875 PLXNB3Q9ULL4 1909 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 GOLGA8CPA6NN73 597 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 hCG_1984214I3L0E3 225 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 PLK4O00444 970 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 FLRT2O43155 660 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 DKC1O60832 514 aaKnown RBP eCLIP9.62□□□□□ -0.87
PRKCH-203ENST00000552875 NPTXRO95502 500 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 ATXN1LP0C7T5 689 aaKnown RBP9.62□□□□□ -0.87
PRKCH-203ENST00000552875 RFC5P40937 340 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 ALDH1A3P47895 512 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 ZNF33AQ06730 810 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 LY6DQ14210 128 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 MXD4Q14582 209 aaPredicted RBP9.62□□□□□ -0.87
PRKCH-203ENST00000552875 SUZ12Q15022 739 aaKnown RBP9.62□□□□□ -0.87
PRKCH-203ENST00000552875 PDGFRLQ15198 375 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 SYCP2LQ5T4T6 812 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 ZNF654Q8IZM8 581 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 ZNF713Q8N859 430 aaPredicted RBP9.62□□□□□ -0.87
PRKCH-203ENST00000552875 KRI1Q8N9T8 703 aaKnown RBP9.62□□□□□ -0.87
PRKCH-203ENST00000552875 RHBDD1Q8TEB9 315 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 FGF11Q92914 225 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 CHFRQ96EP1 664 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 TEKT3Q9BXF9 490 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 TASP1Q9H6P5 420 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 MMP17Q9ULZ9 603 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 ASB3Q9Y575 518 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 EML5Q05BV3 1969 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 COL6A6A6NMZ7 2263 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 COL12A1Q99715 3063 aa9.62□□□□□ -0.87
PRKCH-203ENST00000552875 SPTAN1Q13813 2472 aaKnown RBP9.61□□□□□ -0.87
PRKCH-203ENST00000552875 VWA8A3KMH1 1905 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 hCG_1642624A0A1W2PR95 340 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 SMCO2A6NFE2 343 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 SYN3O14994 580 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 TLX3O43711 291 aaPredicted RBP9.61□□□□□ -0.87
PRKCH-203ENST00000552875 PLEKHA8P1O95397 391 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 CER1O95813 267 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 IGHDP01880 384 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 ZNF883P0CG24 379 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 CPB1P15086 417 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 ACTN2P35609 894 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 AVPR1AP37288 418 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 BFSP1Q12934 665 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 NR1H3Q13133 447 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 CTXN3Q4LDR2 81 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 STXBP5Q5T5C0 1151 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 LRCH2Q5VUJ6 765 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 IL27RAQ6UWB1 636 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 NFXL1Q6ZNB6 911 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 MIER3Q7Z3K6 550 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 ITIH5Q86UX2 942 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 MARCH9Q86YJ5 346 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 RGL4Q8IZJ4 473 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 TMTC2Q8N394 836 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 ZNF513Q8N8E2 541 aaPredicted RBP9.61□□□□□ -0.87
PRKCH-203ENST00000552875 RILPL2Q969X0 211 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 TMEM143Q96AN5 459 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 TMEM176AQ96HP8 235 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 SEMA4CQ9C0C4 833 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 SENP2Q9HC62 589 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 FBRSL1Q9HCM7 1045 aaKnown RBP9.61□□□□□ -0.87
PRKCH-203ENST00000552875 HPS4Q9NQG7 708 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 TBX20Q9UMR3 447 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 MYH9P35579 1960 aaKnown RBP9.61□□□□□ -0.87
PRKCH-203ENST00000552875 THADAQ6YHU6 1953 aa9.61□□□□□ -0.87
PRKCH-203ENST00000552875 A0A1B0GUA9 196 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 TMEM150BA6NC51 233 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 CCDC69A6NI79 296 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 HIP1O00291 1037 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 ZBTB24O43167 697 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-203ENST00000552875 TNFSF14O43557 240 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 PRAMEF12O95522 483 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 CDK4P11802 303 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 JUPP14923 745 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 ARF4P18085 180 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-203ENST00000552875 SDSP20132 328 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 GABRR2P28476 465 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 CDC25CP30307 473 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 GJA4P35212 333 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 PTENP60484 403 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 POU5F1BQ06416 359 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 KCNH2Q12809 1159 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 UBAP2LQ14157 1087 aaKnown RBP9.6□□□□□ -0.87
PRKCH-203ENST00000552875 MAP7D1Q3KQU3 841 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 HSF5Q4G112 596 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms