RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 FOXD2O60548 495 aaPredicted RBP9.29□□□□□ -0.92
CDK4-213ENST00000552713 RPP40O75818 363 aaKnown RBP9.29□□□□□ -0.92
CDK4-213ENST00000552713 SOAT2O75908 522 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 PRAMEF12O95522 483 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 FDPSP14324 419 aaKnown RBP9.29□□□□□ -0.92
CDK4-213ENST00000552713 CYP11B2P19099 503 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 GRM5P41594 1212 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 CDR1P51861 262 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 ECM1Q16610 540 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 CPLX2Q6PUV4 134 aaKnown RBP9.29□□□□□ -0.92
CDK4-213ENST00000552713 TAS1R3Q7RTX0 852 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 CACNA2D4Q7Z3S7 1137 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 RALGPS2Q86X27 583 aaPredicted RBP9.29□□□□□ -0.92
CDK4-213ENST00000552713 YAF2Q8IY57 180 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 TTC9BQ8N6N2 239 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 BEST2Q8NFU1 509 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 DDX12PQ92771 950 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 LOXL4Q96JB6 756 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 SUSD3Q96L08 255 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 TBC1D32Q96NH3 1257 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 PTPRHQ9HD43 1115 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 TNFSF13BQ9Y275 285 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 NUB1Q9Y5A7 615 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 TIMM13Q9Y5L4 95 aaPredicted RBP9.29□□□□□ -0.92
CDK4-213ENST00000552713 CYP46A1Q9Y6A2 500 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 STK36Q9NRP7 1315 aa9.29□□□□□ -0.92
CDK4-213ENST00000552713 OTOL1A6NHN0 477 aaPredicted RBP9.28□□□□□ -0.92
CDK4-213ENST00000552713 BTBD18B2RXH4 712 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 DCLK1O15075 740 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 CCDC192P0DO97 292 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 CPB1P15086 417 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 MCM4P33991 863 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 KRT2P35908 639 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 MPLP40238 635 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 NOVA1P51513 510 aaKnown RBP9.28□□□□□ -0.92
CDK4-213ENST00000552713 FOSBP53539 338 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 FOXC1Q12948 553 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 DUSP4Q13115 394 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 SEZ6Q53EL9 994 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 RNF43Q68DV7 783 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 NAIF1Q69YI7 327 aaPredicted RBP9.28□□□□□ -0.92
CDK4-213ENST00000552713 FSTL4Q6MZW2 842 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 ZNF280DQ6N043 979 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 KDF1Q8NAX2 398 aaPredicted RBP9.28□□□□□ -0.92
CDK4-213ENST00000552713 MSANTD3Q96H12 275 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 ZBTB45Q96K62 511 aaPredicted RBP9.28□□□□□ -0.92
CDK4-213ENST00000552713 ACO2Q99798 780 aaKnown RBP9.28□□□□□ -0.92
CDK4-213ENST00000552713 SMG9Q9H0W8 520 aaKnown RBP9.28□□□□□ -0.92
CDK4-213ENST00000552713 DUSP15Q9H1R2 295 aaPredicted RBP9.28□□□□□ -0.92
CDK4-213ENST00000552713 TUFT1Q9NNX1 390 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.28□□□□□ -0.92
CDK4-213ENST00000552713 ORC3Q9UBD5 711 aaPredicted RBP9.28□□□□□ -0.92
CDK4-213ENST00000552713 TUBGCP4Q9UGJ1 667 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 SLC27A5Q9Y2P5 690 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 PKD1L2Q7Z442 2459 aa9.28□□□□□ -0.92
CDK4-213ENST00000552713 ARHGEF35A5YM69 484 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 C4orf47A7E2U8 309 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 K7ERI5 159 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 KCNE1P15382 129 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 XBP1P17861 261 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 YARSP54577 528 aaKnown RBP9.27□□□□□ -0.93
CDK4-213ENST00000552713 CYP4F8P98187 520 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 SPAG1Q07617 926 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 ZNF568Q3ZCX4 644 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 PLK5Q496M5 336 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 ARHGAP29Q52LW3 1261 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 GPR158Q5T848 1215 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 C1orf228Q6PIY5 440 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 SYNPOQ8N3V7 929 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 LEMD2Q8NC56 503 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 FAM200AQ8TCP9 573 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 E2F7Q96AV8 911 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 ZC3H10Q96K80 434 aaKnown RBP9.27□□□□□ -0.93
CDK4-213ENST00000552713 HHIPQ96QV1 700 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 NACC1Q96RE7 527 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 TMEM209Q96SK2 561 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 POLR3CQ9BUI4 534 aaPredicted RBP9.27□□□□□ -0.93
CDK4-213ENST00000552713 EDEM2Q9BV94 578 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 CCDC94Q9BW85 323 aaPredicted RBP9.27□□□□□ -0.93
CDK4-213ENST00000552713 TARS2Q9BW92 718 aaKnown RBP9.27□□□□□ -0.93
CDK4-213ENST00000552713 GPR88Q9GZN0 384 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 FBRSL1Q9HCM7 1045 aaKnown RBP9.27□□□□□ -0.93
CDK4-213ENST00000552713 PDRG1Q9NUG6 133 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 SLC38A7Q9NVC3 462 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 CNTN3Q9P232 1028 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 TPCN1Q9ULQ1 816 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 PCDHB8Q9UN66 801 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 LAMA1P25391 3075 aa9.27□□□□□ -0.93
CDK4-213ENST00000552713 HELZP42694 1942 aaKnown RBP9.27□□□□□ -0.93
CDK4-213ENST00000552713 CCDC163A0A0D9SF12 145 aa9.26□□□□□ -0.93
CDK4-213ENST00000552713 SRRM3A6NNA2 597 aaPredicted RBP9.26□□□□□ -0.93
CDK4-213ENST00000552713 M0QZQ0 153 aa9.26□□□□□ -0.93
CDK4-213ENST00000552713 PFKFB2O60825 505 aa9.26□□□□□ -0.93
CDK4-213ENST00000552713 CDKL5O76039 1030 aa9.26□□□□□ -0.93
CDK4-213ENST00000552713 OAZ2O95190 189 aa9.26□□□□□ -0.93
CDK4-213ENST00000552713 EGFP01133 1207 aa9.26□□□□□ -0.93
CDK4-213ENST00000552713 HARSP12081 509 aaKnown RBP9.26□□□□□ -0.93
CDK4-213ENST00000552713 PROZP22891 400 aa9.26□□□□□ -0.93
CDK4-213ENST00000552713 U2AF2P26368 475 aaKnown RBP eCLIP9.26□□□□□ -0.93
CDK4-213ENST00000552713 RPL9P32969 192 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms