RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 CCDC62Q6P9F0 684 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 MPZL3Q6UWV2 235 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 FASTKD5Q7L8L6 764 aaKnown RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 TMC6Q7Z403 805 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 RTN4RL1Q86UN2 441 aaPredicted RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 ZSWIM9Q86XI8 627 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 MAGEB6Q8N7X4 407 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 TTC8Q8TAM2 541 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 AUTS2Q8WXX7 1259 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 EAF2Q96CJ1 260 aaPredicted RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 FOXRED1Q96CU9 486 aaPredicted RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 HSPBAP1Q96EW2 488 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 PARK7Q99497 189 aaKnown RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 CDX2Q99626 313 aaPredicted RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 FOXB1Q99853 325 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 MYL10Q9BUA6 226 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 RHOBTB2Q9BYZ6 727 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 KATNBL1Q9H079 304 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 QRSL1Q9H0R6 528 aaKnown RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 OSBPL5Q9H0X9 879 aaPredicted RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 POFUT1Q9H488 388 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 BCAS3Q9H6U6 928 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 ZNF552Q9H707 407 aaPredicted RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 PCDH18Q9HCL0 1135 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 SLC39A2Q9NP94 309 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 INCENPQ9NQS7 918 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 CCM2LQ9NUG4 571 aaPredicted RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 SIRT5Q9NXA8 310 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 GALNT8Q9NY28 637 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 RAPGEFL1Q9UHV5 662 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 ZMYND8Q9ULU4 1186 aaPredicted RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 EDARQ9UNE0 448 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 NUMBLQ9Y6R0 609 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 ECM29Q5VYK3 1845 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 CACNA1HO95180 2353 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 PNMA6EA0A0J9YXQ4 647 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 PRSS38A1L453 326 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 ZNF839A8K0R7 811 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 NFIBO00712 420 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 KIAA0355O15063 1070 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 PCDHGA12O60330 932 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 MAP4K4O95819 1239 aaPredicted RBP2.85□□□□□ -1.95
CPSF6-207ENST00000551516 LPLP06858 475 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 PFKLP17858 780 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 XPAP23025 273 aaPredicted RBP2.85□□□□□ -1.95
CPSF6-207ENST00000551516 AKAP5P24588 427 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 HOXD10P28358 340 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 VIPR1P32241 457 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 MC4RP32245 332 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 SHMT1P34896 483 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 BTDP43251 543 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 HMGCS2P54868 508 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 TBX4P57082 545 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 MRPS9P82933 396 aaKnown RBP2.85□□□□□ -1.95
CPSF6-207ENST00000551516 SRSF3P84103 164 aaKnown RBP2.85□□□□□ -1.95
CPSF6-207ENST00000551516 CHAF1AQ13111 956 aaPredicted RBP2.85□□□□□ -1.95
CPSF6-207ENST00000551516 GTF2H3Q13889 308 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 ODF1Q14990 250 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 WDR43Q15061 677 aaKnown RBP eCLIP2.85□□□□□ -1.95
CPSF6-207ENST00000551516 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.85□□□□□ -1.958e-8■■■■■ 41
CPSF6-207ENST00000551516 METTL24Q5JXM2 366 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 ARTNQ5T4W7 220 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 SLFN12LQ6IEE8 588 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 CATSPERGQ6ZRH7 1159 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 ANKRD33Q7Z3H0 272 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 GPR142Q7Z601 462 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 ZNF605Q86T29 641 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 TPH2Q8IWU9 490 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 CMTR2Q8IYT2 770 aaKnown RBP2.85□□□□□ -1.95
CPSF6-207ENST00000551516 MIER2Q8N344 545 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 KLHDC9Q8NEP7 349 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 RAET1EQ8TD07 263 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 ACER1Q8TDN7 264 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 IGDCC4Q8TDY8 1250 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 RSAD2Q8WXG1 361 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 CPA5Q8WXQ8 436 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 JADE3Q92613 823 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 CLIP3Q96DZ5 547 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 TEKT5Q96M29 485 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 CTAGE1Q96RT6 745 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 TMEM209Q96SK2 561 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 NUP88Q99567 741 aaPredicted RBP2.85□□□□□ -1.95
CPSF6-207ENST00000551516 MEIS3Q99687 375 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 RIOK1Q9BRS2 568 aaKnown RBP2.85□□□□□ -1.95
CPSF6-207ENST00000551516 HTATIP2Q9BUP3 242 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 STK31Q9BXU1 1019 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 CHMP4AQ9BY43 222 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 RNF38Q9H0F5 515 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 CSRNP2Q9H175 543 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 SEMA4AQ9H3S1 761 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 C11orf49Q9H6J7 331 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 ZFP64Q9NPA5 681 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 DLL4Q9NR61 685 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 FAM53CQ9NYF3 392 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 ARHGAP20Q9P2F6 1191 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 GABBR1Q9UBS5 961 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 RCAN3Q9UKA8 241 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 TBX21Q9UL17 535 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 ZBTB21Q9ULJ3 1066 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 SYNPO2Q9UMS6 1093 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms