RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 RBP5P82980 135 aa21■□□□□ 0.95
SSH1-209ENST00000551165 ZNF572Q7Z3I7 529 aaPredicted RBP21■□□□□ 0.95
SSH1-209ENST00000551165 ELOVL4Q9GZR5 314 aa21■□□□□ 0.95
SSH1-209ENST00000551165 RBM12Q9NTZ6 932 aaKnown RBP21■□□□□ 0.95
SSH1-209ENST00000551165 PARP2Q9UGN5 583 aa21■□□□□ 0.95
SSH1-209ENST00000551165 IPPQ9Y573 584 aa21■□□□□ 0.95
SSH1-209ENST00000551165 TRPV2Q9Y5S1 764 aa21■□□□□ 0.95
SSH1-209ENST00000551165 GJB6O95452 261 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 NFX1Q12986 1120 aaKnown RBP20.99■□□□□ 0.95
SSH1-209ENST00000551165 DCAF12L1Q5VU92 463 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 MMS22LQ6ZRQ5 1243 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 WDTC1Q8N5D0 677 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 VRTNQ9H8Y1 702 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 TRMT13Q9NUP7 481 aaKnown RBP20.99■□□□□ 0.95
SSH1-209ENST00000551165 ST3GAL5Q9UNP4 418 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 MTA2O94776 668 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 HOXD10P28358 340 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 ATICP31939 592 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 MAP2K2P36507 400 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 MARCKSL1P49006 195 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 PTP4A2Q12974 167 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 PTGISQ16647 500 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 TWF2Q6IBS0 349 aaKnown RBP20.99■□□□□ 0.95
SSH1-209ENST00000551165 CD302Q8IX05 232 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 KRT35Q92764 455 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 SENP6Q9GZR1 1112 aaPredicted RBP20.99■□□□□ 0.95
SSH1-209ENST00000551165 AGO3Q9H9G7 860 aaKnown RBP20.99■□□□□ 0.95
SSH1-209ENST00000551165 GOLGA2P5Q9HBQ8 144 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 ZNF446Q9NWS9 450 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 CNTN3Q9P232 1028 aa20.99■□□□□ 0.95
SSH1-209ENST00000551165 RALGAPA2Q2PPJ7 1873 aa20.98■□□□□ 0.95
SSH1-209ENST00000551165 SMIM28A0A1B0GU29 152 aa20.98■□□□□ 0.95
SSH1-209ENST00000551165 CEP104O60308 925 aa20.98■□□□□ 0.95
SSH1-209ENST00000551165 COMTP21964 271 aa20.98■□□□□ 0.95
SSH1-209ENST00000551165 CST5P28325 142 aaPredicted RBP20.98■□□□□ 0.95
SSH1-209ENST00000551165 MGAT3Q09327 533 aa20.98■□□□□ 0.95
SSH1-209ENST00000551165 CFAP221Q4G0U5 840 aa20.98■□□□□ 0.95
SSH1-209ENST00000551165 APBB1IPQ7Z5R6 666 aaPredicted RBP20.98■□□□□ 0.95
SSH1-209ENST00000551165 SLC4A11Q8NBS3 891 aa20.98■□□□□ 0.95
SSH1-209ENST00000551165 MSANTD4Q8NCY6 345 aa20.98■□□□□ 0.95
SSH1-209ENST00000551165 C1orf131Q8NDD1 294 aaKnown RBP20.98■□□□□ 0.95
SSH1-209ENST00000551165 ZNF296Q8WUU4 475 aaPredicted RBP20.98■□□□□ 0.95
SSH1-209ENST00000551165 ALG3Q92685 438 aa20.98■□□□□ 0.95
SSH1-209ENST00000551165 CD19P15391 556 aa20.97■□□□□ 0.95
SSH1-209ENST00000551165 THPOP40225 353 aa20.97■□□□□ 0.95
SSH1-209ENST00000551165 KCTD19Q17RG1 926 aaPredicted RBP20.97■□□□□ 0.95
SSH1-209ENST00000551165 NT5DC4Q86YG4 428 aa20.97■□□□□ 0.95
SSH1-209ENST00000551165 HDAC7Q8WUI4 952 aa20.97■□□□□ 0.95
SSH1-209ENST00000551165 ADAM22Q9P0K1 906 aa20.97■□□□□ 0.95
SSH1-209ENST00000551165 M0QZ92 97 aa20.97■□□□□ 0.95
SSH1-209ENST00000551165 CILPO75339 1184 aa20.97■□□□□ 0.95
SSH1-209ENST00000551165 RPS6KA5O75582 802 aa20.97■□□□□ 0.95
SSH1-209ENST00000551165 INHAP05111 366 aa20.97■□□□□ 0.95
SSH1-209ENST00000551165 PAFAH1B1P43034 410 aa20.97■□□□□ 0.95
SSH1-209ENST00000551165 SOX4Q06945 474 aaPredicted RBP20.97■□□□□ 0.95
SSH1-209ENST00000551165 C11orf63Q6NUN7 778 aa20.97■□□□□ 0.95
SSH1-209ENST00000551165 DENND1BQ6P3S1 775 aa20.97■□□□□ 0.95
SSH1-209ENST00000551165 ZMYND10O75800 440 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 SEC31AO94979 1220 aaKnown RBP20.96■□□□□ 0.95
SSH1-209ENST00000551165 ACLYP53396 1101 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 ZNF211Q13398 564 aaPredicted RBP20.96■□□□□ 0.95
SSH1-209ENST00000551165 ITGA7Q13683 1181 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 DAB2IPQ5VWQ8 1189 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 AADACL2Q6P093 401 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 TRIM72Q6ZMU5 477 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 SESTD1Q86VW0 696 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 ZFP42Q96MM3 310 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 AFF1P51825 1210 aaKnown RBP20.96■□□□□ 0.95
SSH1-209ENST00000551165 VSNL1P62760 191 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 PHF13Q86YI8 300 aaPredicted RBP20.96■□□□□ 0.95
SSH1-209ENST00000551165 RPGRIP1Q96KN7 1286 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 LRRC1Q9BTT6 524 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 UVRAGQ9P2Y5 699 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 CYTH4Q9UIA0 394 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 ANAPC7Q9UJX3 599 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 DERAQ9Y315 318 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 NME7Q9Y5B8 376 aa20.96■□□□□ 0.95
SSH1-209ENST00000551165 IGFBP6P24592 240 aaPredicted RBP20.95■□□□□ 0.94
SSH1-209ENST00000551165 C9orf57Q5W0N0 161 aa20.95■□□□□ 0.94
SSH1-209ENST00000551165 LHX8Q68G74 356 aa20.95■□□□□ 0.94
SSH1-209ENST00000551165 RSPH3Q86UC2 560 aa20.95■□□□□ 0.94
SSH1-209ENST00000551165 PCSK9Q8NBP7 692 aaKnown RBP20.95■□□□□ 0.94
SSH1-209ENST00000551165 CACNG4Q9UBN1 327 aa20.95■□□□□ 0.94
SSH1-209ENST00000551165 TJP2Q9UDY2 1190 aa20.95■□□□□ 0.94
SSH1-209ENST00000551165 SNX9Q9Y5X1 595 aa20.95■□□□□ 0.94
SSH1-209ENST00000551165 NDST1P52848 882 aa20.95■□□□□ 0.94
SSH1-209ENST00000551165 PXYLP1Q8TE99 480 aa20.95■□□□□ 0.94
SSH1-209ENST00000551165 PBKQ96KB5 322 aa20.95■□□□□ 0.94
SSH1-209ENST00000551165 MRPL45Q9BRJ2 306 aaKnown RBP20.95■□□□□ 0.94
SSH1-209ENST00000551165 PLEKHA4Q9H4M7 779 aa20.95■□□□□ 0.94
SSH1-209ENST00000551165 PDCD11Q14690 1871 aaKnown RBP20.94■□□□□ 0.94
SSH1-209ENST00000551165 HCRTO43612 131 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 MMP8P22894 467 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 YWHAEP62258 255 aaKnown RBP20.94■□□□□ 0.94
SSH1-209ENST00000551165 TNNC1P63316 161 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 XKR4Q5GH76 650 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 RNF180Q86T96 592 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 MMGT1Q8N4V1 131 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 USP38Q8NB14 1042 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 BEST2Q8NFU1 509 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms