RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 HOXC12P31275 282 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 SREBF1P36956 1147 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 RGS2P41220 211 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 ECI1P42126 302 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 TRAPPC10P48553 1259 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 CTCFP49711 727 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-213ENST00000550629 ORC2Q13416 577 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-213ENST00000550629 WDR78Q5VTH9 848 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 CNKSR3Q6P9H4 555 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 USP17L6PQ6QN14 398 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 MAMDC4Q6UXC1 1216 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 SLC30A10Q6XR72 485 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 FAM129CQ86XR2 697 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 MORC4Q8TE76 937 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 CRYGNQ8WXF5 182 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 RMDN3Q96TC7 470 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 NRBP1Q9UHY1 535 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 TMEFF2Q9UIK5 374 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-213ENST00000550629 GJD2Q9UKL4 321 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 PCDHA6Q9UN73 950 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 KCNJ14Q9UNX9 436 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 PCDHA8Q9Y5H6 950 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 VPS37CA5D8V6 355 aaPredicted RBP6.49□□□□□ -1.37
SCAF11-213ENST00000550629 ASB14A6NK59 587 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 BTBD18B2RXH4 712 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 SCG5P05408 212 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 CYP3A4P08684 503 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 GCFC2P16383 781 aaKnown RBP6.49□□□□□ -1.37
SCAF11-213ENST00000550629 PFKLP17858 780 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 EDNRBP24530 442 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 NONOQ15233 471 aaKnown RBP eCLIP6.49□□□□□ -1.37
SCAF11-213ENST00000550629 UBE2SQ16763 222 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 DDR2Q16832 855 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 PRSS53Q2L4Q9 553 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 SLC10A6Q3KNW5 377 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 NAALADL2Q58DX5 795 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 RILPL1Q5EBL4 403 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 ARHGEF16Q5VV41 709 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 ATL3Q6DD88 541 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 PPP4R3AQ6IN85 833 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 MOXD1Q6UVY6 613 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 NIPA1Q7RTP0 329 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 DPP9Q86TI2 863 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 CCDC103Q8IW40 242 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 NETO2Q8NC67 525 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 KREMEN2Q8NCW0 462 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 PLEKHO2Q8TD55 490 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 TBC1D5Q92609 795 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 ANO3Q9BYT9 981 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 BCAS3Q9H6U6 928 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 PXMP2Q9NR77 195 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 GJB4Q9NTQ9 266 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 MARCH2Q9P0N8 246 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 COL20A1Q9P218 1284 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 SRRDQ9UH36 339 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 NOL7Q9UMY1 257 aaKnown RBP6.49□□□□□ -1.37
SCAF11-213ENST00000550629 MTMR6Q9Y217 621 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 ATP6V1DQ9Y5K8 247 aa6.49□□□□□ -1.37
SCAF11-213ENST00000550629 CYP3A7-CYP3A51PA0A087WV96 503 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 MAFGO15525 162 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 DTNBO60941 627 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 EIF3JO75822 258 aaKnown RBP6.48□□□□□ -1.37
SCAF11-213ENST00000550629 BMP15O95972 392 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 NTRK1P04629 796 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 CAPNS1P04632 268 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 PGK2P07205 417 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 HSPA8P11142 646 aaKnown RBP6.48□□□□□ -1.37
SCAF11-213ENST00000550629 ATF2P15336 505 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 CYP3A7P24462 503 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 CTGFP29279 349 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 CCND2P30279 289 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 CIITAP33076 1130 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 GRIA2P42262 883 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 KCNJ6P48051 423 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 LIMS1P48059 325 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 FLT3LGP49771 235 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 ALDH5A1P51649 535 aaPredicted RBP6.48□□□□□ -1.37
SCAF11-213ENST00000550629 GFRA1P56159 465 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 GUCY1B3Q02153 619 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 CNTN2Q02246 1040 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 PRKCZQ05513 592 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 RESTQ13127 1097 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 PGM5Q15124 567 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 TARBP2Q15633 366 aaKnown RBP6.48□□□□□ -1.37
SCAF11-213ENST00000550629 STXBP2Q15833 593 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 PKN2Q16513 984 aaKnown RBP6.48□□□□□ -1.37
SCAF11-213ENST00000550629 JAKMIP3Q5VZ66 844 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 E4F1Q66K89 784 aaPredicted RBP6.48□□□□□ -1.37
SCAF11-213ENST00000550629 IQCEQ6IPM2 695 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 KCNV1Q6PIU1 500 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 NEK8Q86SG6 692 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 CD99L2Q8TCZ2 262 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 ALG3Q92685 438 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 TSPAN17Q96FV3 270 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 PEX11GQ96HA9 241 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 MAML3Q96JK9 1138 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 CDHR1Q96JP9 859 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 PWWP2AQ96N64 755 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 MBOAT7Q96N66 472 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 TAAR1Q96RJ0 339 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms