RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 HYOU1Q9Y4L1 999 aa13.42□□□□□ -0.26
CACNB3-217ENST00000550483 LAMA2P24043 3122 aaKnown RBP13.42□□□□□ -0.26
CACNB3-217ENST00000550483 SMIM28A0A1B0GU29 152 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 DYNC1I1O14576 645 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 MEFVO15553 781 aaPredicted RBP13.41□□□□□ -0.26
CACNB3-217ENST00000550483 CTIFO43310 598 aaKnown RBP13.41□□□□□ -0.26
CACNB3-217ENST00000550483 MOCS3O95396 460 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 PARNO95453 639 aaKnown RBP13.41□□□□□ -0.26
CACNB3-217ENST00000550483 MMEP08473 750 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 ITGA4P13612 1032 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 LRPAP1P30533 357 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 NSFP46459 744 aaKnown RBP13.41□□□□□ -0.26
CACNB3-217ENST00000550483 NFX1Q12986 1120 aaKnown RBP13.41□□□□□ -0.26
CACNB3-217ENST00000550483 CLUL1Q15846 466 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 SV2CQ496J9 727 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 LIN9Q5TKA1 542 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 UNC93AQ86WB7 457 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 GPIHBP1Q8IV16 184 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 RPS6KC1Q96S38 1066 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 FTHL17Q9BXU8 183 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 MIS12Q9H081 205 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 RNF216Q9NWF9 866 aaPredicted RBP13.41□□□□□ -0.26
CACNB3-217ENST00000550483 NXF1Q9UBU9 619 aaKnown RBP13.41□□□□□ -0.26
CACNB3-217ENST00000550483 SNX12Q9UMY4 172 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 CAPN6Q9Y6Q1 641 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 DUSP10Q9Y6W6 482 aa13.41□□□□□ -0.26
CACNB3-217ENST00000550483 UQCRHLA0A096LP55 91 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 EFCAB8A8MWE9 144 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 THAP12O43422 761 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 CILPO75339 1184 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 ABL1P00519 1130 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 CYP1A2P05177 515 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 UQCRHP07919 91 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 CTSHP09668 335 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 COL6A1P12109 1028 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 UNGP13051 313 aaPredicted RBP13.4□□□□□ -0.26
CACNB3-217ENST00000550483 AMPD2Q01433 879 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
CACNB3-217ENST00000550483 TAF3Q5VWG9 929 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 C11orf63Q6NUN7 778 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 DPH6Q7L8W6 267 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 PHF13Q86YI8 300 aaPredicted RBP13.4□□□□□ -0.26
CACNB3-217ENST00000550483 TMEM35BQ8NCS4 154 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 SMG8Q8ND04 991 aaKnown RBP13.4□□□□□ -0.26
CACNB3-217ENST00000550483 PPP1R13LQ8WUF5 828 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 PACSIN1Q9BY11 444 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 MRPL47Q9HD33 250 aaKnown RBP13.4□□□□□ -0.26
CACNB3-217ENST00000550483 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.4□□□□□ -0.26
CACNB3-217ENST00000550483 GDAP2Q9NXN4 497 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 OGDHLQ9ULD0 1010 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 PADI3Q9ULW8 664 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 BARX2Q9UMQ3 279 aaPredicted RBP13.4□□□□□ -0.26
CACNB3-217ENST00000550483 SCINQ9Y6U3 715 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 ANK1P16157 1881 aa13.4□□□□□ -0.26
CACNB3-217ENST00000550483 UMODL1Q5DID0 1318 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 A0A0U1RQF3 1178 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 ARHGEF37A1IGU5 675 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 PITPNM1O00562 1244 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 PIRO00625 290 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 FANCGO15287 622 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 PALMO75781 387 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 CALB1P05937 261 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 VDRP11473 427 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 CKBP12277 381 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 CCL5P13501 91 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 RPL9P32969 192 aaKnown RBP13.39□□□□□ -0.27
CACNB3-217ENST00000550483 CDH5P33151 784 aaPredicted RBP13.39□□□□□ -0.27
CACNB3-217ENST00000550483 TAF6P49848 677 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 MNX1P50219 401 aaPredicted RBP13.39□□□□□ -0.27
CACNB3-217ENST00000550483 DSC3Q14574 896 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 LPIN1Q14693 890 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 C9orf57Q5W0N0 161 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 Q7L0L9 218 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 SLFN11Q7Z7L1 901 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 TPCN2Q8NHX9 752 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 SPATA18Q8TC71 538 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 ZNF606Q8WXB4 792 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 WNT8BQ93098 351 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 PCDHB18PQ96TA0 734 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 LHX5Q9H2C1 402 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 TRMT13Q9NUP7 481 aaKnown RBP13.39□□□□□ -0.27
CACNB3-217ENST00000550483 STRIP2Q9ULQ0 834 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 NR2E3Q9Y5X4 410 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 VCANP13611 3396 aa13.39□□□□□ -0.27
CACNB3-217ENST00000550483 CTAGE15A4D2H0 777 aa13.38□□□□□ -0.27
CACNB3-217ENST00000550483 GRID2IPA4D2P6 1211 aa13.38□□□□□ -0.27
CACNB3-217ENST00000550483 TMCO5BA8MYB1 307 aa13.38□□□□□ -0.27
CACNB3-217ENST00000550483 MIF4GDA9UHW6 222 aaKnown RBP13.38□□□□□ -0.27
CACNB3-217ENST00000550483 INPPL1O15357 1258 aa13.38□□□□□ -0.27
CACNB3-217ENST00000550483 BUB1O43683 1085 aa13.38□□□□□ -0.27
CACNB3-217ENST00000550483 ATP1A1P05023 1023 aaKnown RBP13.38□□□□□ -0.27
CACNB3-217ENST00000550483 THP07101 528 aa13.38□□□□□ -0.27
CACNB3-217ENST00000550483 TUBBP07437 444 aa13.38□□□□□ -0.27
CACNB3-217ENST00000550483 CTAGE8P0CG41 777 aa13.38□□□□□ -0.27
CACNB3-217ENST00000550483 SELPP16109 830 aa13.38□□□□□ -0.27
CACNB3-217ENST00000550483 CD58P19256 250 aa13.38□□□□□ -0.27
CACNB3-217ENST00000550483 ABCB4P21439 1286 aa13.38□□□□□ -0.27
CACNB3-217ENST00000550483 AKAP5P24588 427 aa13.38□□□□□ -0.27
CACNB3-217ENST00000550483 GJA8P48165 433 aa13.38□□□□□ -0.27
CACNB3-217ENST00000550483 CDK7P50613 346 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms