RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 TRAIPQ9BWF2 469 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 ABCB6Q9NP58 842 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 PARVAQ9NVD7 372 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 TAS2R14Q9NYV8 317 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 ADAM22Q9P0K1 906 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 CNOT8Q9UFF9 292 aaKnown RBP14.32□□□□□ -0.12
PTCH1-215ENST00000547672 BARX2Q9UMQ3 279 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-215ENST00000547672 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.32□□□□□ -0.12
PTCH1-215ENST00000547672 CITO14578 2027 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 TARSL2A2RTX5 802 aaKnown RBP14.31□□□□□ -0.12
PTCH1-215ENST00000547672 CCDC66A2RUB6 948 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 MYO1FO00160 1098 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 BUB1BO60566 1050 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-215ENST00000547672 RECQL4O94761 1208 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 FTCDO95954 541 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 WEE2P0C1S8 567 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 ITGA4P13612 1032 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 HSPA6P17066 643 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 CD58P19256 250 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 THPOP40225 353 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 HIC1Q14526 733 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 BRD3Q15059 726 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 SV2CQ496J9 727 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 DPH6Q7L8W6 267 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 NT5DC3Q86UY8 548 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 UNC93AQ86WB7 457 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 MMGT1Q8N4V1 131 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 ZNF564Q8TBZ8 553 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-215ENST00000547672 ACTRT1Q8TDG2 376 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 TMEM176AQ96HP8 235 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 HES6Q96HZ4 224 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 CAPZA3Q96KX2 299 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 MMS19Q96T76 1030 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 NUP85Q9BW27 656 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 SENP6Q9GZR1 1112 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-215ENST00000547672 WDR35Q9P2L0 1181 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 TTC7AQ9ULT0 858 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-215ENST00000547672 ST3GAL5Q9UNP4 418 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 GIT1Q9Y2X7 761 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 NOC2LQ9Y3T9 749 aaKnown RBP14.31□□□□□ -0.12
PTCH1-215ENST00000547672 ANK1P16157 1881 aa14.31□□□□□ -0.12
PTCH1-215ENST00000547672 SMIM28A0A1B0GU29 152 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 KBTBD13C9JR72 458 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 KCNK3O14649 394 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 ZNF623O75123 536 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 CDH5P33151 784 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-215ENST00000547672 CETN2P41208 172 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 NOMO3P69849 1222 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 IRX5P78411 483 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-215ENST00000547672 INCA1Q0VD86 236 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 TRIM32Q13049 653 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 ELF2Q15723 593 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 CNGA2Q16280 664 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 NAA35Q5VZE5 725 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 FAM228AQ86W67 206 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 ERICH1Q86X53 443 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 CYFIP2Q96F07 1278 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 NT5C1AQ9BXI3 368 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 EIF2AQ9BY44 585 aaKnown RBP14.3□□□□□ -0.12
PTCH1-215ENST00000547672 CARD9Q9H257 536 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 RNF216Q9NWF9 866 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-215ENST00000547672 STXBP5LQ9Y2K9 1186 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 IPPQ9Y573 584 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 ALG6Q9Y672 507 aa14.3□□□□□ -0.12
PTCH1-215ENST00000547672 ARHGEF37A1IGU5 675 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 CCDC188H7C350 402 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 PGRMC1O00264 195 aaKnown RBP14.29□□□□□ -0.12
PTCH1-215ENST00000547672 SRGAP2O75044 1071 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 CILPO75339 1184 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 INHAP05111 366 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 CD19P15391 556 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 NFX1Q12986 1120 aaKnown RBP14.29□□□□□ -0.12
PTCH1-215ENST00000547672 PAK2Q13177 524 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 MAP9Q49MG5 647 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 SGO2Q562F6 1265 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 UBXN11Q5T124 520 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 MRPL10Q7Z7H8 261 aaKnown RBP14.29□□□□□ -0.12
PTCH1-215ENST00000547672 PALB2Q86YC2 1186 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 SPATA4Q8NEY3 305 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-215ENST00000547672 CXorf38Q8TB03 319 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 TMEM40Q8WWA1 233 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 MAIP1Q8WWC4 291 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 CPA5Q8WXQ8 436 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 ARHGEF26Q96DR7 871 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 HEXIM2Q96MH2 286 aaKnown RBP14.29□□□□□ -0.12
PTCH1-215ENST00000547672 GDAP2Q9NXN4 497 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 IP6K2Q9UHH9 426 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 UMODL1Q5DID0 1318 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 RALGAPA2Q2PPJ7 1873 aa14.29□□□□□ -0.12
PTCH1-215ENST00000547672 TRIP12Q14669 1992 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-215ENST00000547672 GOLGA6L10A0A0M3HER8 536 aa14.28□□□□□ -0.12
PTCH1-215ENST00000547672 PIRO00625 290 aa14.28□□□□□ -0.12
PTCH1-215ENST00000547672 ATP8B1O43520 1251 aa14.28□□□□□ -0.12
PTCH1-215ENST00000547672 SPOPO43791 374 aa14.28□□□□□ -0.12
PTCH1-215ENST00000547672 CEP104O60308 925 aa14.28□□□□□ -0.12
PTCH1-215ENST00000547672 CHRNA1P02708 482 aa14.28□□□□□ -0.12
PTCH1-215ENST00000547672 DESP17661 470 aa14.28□□□□□ -0.12
PTCH1-215ENST00000547672 MMP8P22894 467 aa14.28□□□□□ -0.12
PTCH1-215ENST00000547672 RPL9P32969 192 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms