RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 CRYBB1P53674 252 aaPredicted RBP17.59■□□□□ 0.41
BRF1-208ENST00000546997 GUCY1A3Q02108 690 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 PTPN11Q06124 597 aaPredicted RBP17.59■□□□□ 0.41
BRF1-208ENST00000546997 PPP3CAQ08209 521 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 CATSPER4Q7RTX7 472 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 PARP9Q8IXQ6 854 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 SH2D3CQ8N5H7 860 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 PARD3BQ8TEW8 1205 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 CYFIP2Q96F07 1278 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 SENP6Q9GZR1 1112 aaPredicted RBP17.59■□□□□ 0.41
BRF1-208ENST00000546997 TOPORSQ9NS56 1045 aaPredicted RBP17.59■□□□□ 0.41
BRF1-208ENST00000546997 NOD1Q9Y239 953 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 A0A1B0GUA9 196 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 EZRP15311 586 aaKnown RBP17.59■□□□□ 0.41
BRF1-208ENST00000546997 JAM2P57087 298 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 U2AF1L4Q8WU68 220 aaKnown RBP17.59■□□□□ 0.41
BRF1-208ENST00000546997 ARMC5Q96C12 935 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 CCDC114Q96M63 670 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 KIAA1586Q9HCI6 787 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 CD248Q9HCU0 757 aa17.59■□□□□ 0.41
BRF1-208ENST00000546997 AJAP1Q9UKB5 411 aaPredicted RBP17.59■□□□□ 0.41
BRF1-208ENST00000546997 BZW2Q9Y6E2 419 aaKnown RBP17.59■□□□□ 0.41
BRF1-208ENST00000546997 A0A087X0T9 212 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 OGTO15294 1046 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 HEXIM1O94992 359 aaKnown RBP17.58■□□□□ 0.4
BRF1-208ENST00000546997 FAM228BP0C875 321 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 DLATP10515 647 aaKnown RBP17.58■□□□□ 0.4
BRF1-208ENST00000546997 GCLMP48507 274 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 MNX1P50219 401 aaPredicted RBP17.58■□□□□ 0.4
BRF1-208ENST00000546997 MCCD1P59942 119 aaPredicted RBP17.58■□□□□ 0.4
BRF1-208ENST00000546997 OSTNP61366 133 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 SATB1Q01826 763 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 MGAT3Q09327 533 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 IFT88Q13099 833 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 XRCC4Q13426 336 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 CUL1Q13616 776 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 TRIM71Q2Q1W2 868 aaKnown RBP17.58■□□□□ 0.4
BRF1-208ENST00000546997 AGBL2Q5U5Z8 902 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 RSPH3Q86UC2 560 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 TMEM192Q8IY95 271 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 THNSL1Q8IYQ7 743 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 LRRC45Q96CN5 670 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 TRAIPQ9BWF2 469 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 OSBPL7Q9BZF2 842 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 RABEP2Q9H5N1 569 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 RBAKQ9NYW8 714 aaPredicted RBP17.58■□□□□ 0.4
BRF1-208ENST00000546997 ADAMTS1Q9UHI8 967 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 TRPV2Q9Y5S1 764 aa17.58■□□□□ 0.4
BRF1-208ENST00000546997 MYH10P35580 1976 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 PTPRJQ12913 1337 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 M0QZ92 97 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 ARVCFO00192 962 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 TRAPPC3O43617 180 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 LDHAP00338 332 aaKnown RBP17.57■□□□□ 0.4
BRF1-208ENST00000546997 GLI1P08151 1106 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 CALRP27797 417 aaKnown RBP17.57■□□□□ 0.4
BRF1-208ENST00000546997 PRKCIP41743 596 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 CARSP49589 748 aaKnown RBP17.57■□□□□ 0.4
BRF1-208ENST00000546997 PTK2Q05397 1052 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 PTK7Q13308 1070 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 ENOX2Q16206 610 aaKnown RBP17.57■□□□□ 0.4
BRF1-208ENST00000546997 KCTD16Q68DU8 428 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 CYB5D1Q6P9G0 228 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 GJB7Q6PEY0 223 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 FUKQ8N0W3 1084 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.57■□□□□ 0.4
BRF1-208ENST00000546997 CRISPLD2Q9H0B8 497 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 EPB41L5Q9HCM4 733 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 SALL4Q9UJQ4 1053 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 NFU1Q9UMS0 254 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 NOC2LQ9Y3T9 749 aaKnown RBP17.57■□□□□ 0.4
BRF1-208ENST00000546997 DNAJC8O75937 253 aaPredicted RBP17.57■□□□□ 0.4
BRF1-208ENST00000546997 TNNC1P63316 161 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 LMBRD2Q68DH5 695 aaPredicted RBP17.57■□□□□ 0.4
BRF1-208ENST00000546997 ZNF571Q7Z3V5 609 aaPredicted RBP17.57■□□□□ 0.4
BRF1-208ENST00000546997 FAM228AQ86W67 206 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 FMNL3Q8IVF7 1028 aa17.57■□□□□ 0.4
BRF1-208ENST00000546997 CPSF3Q9UKF6 684 aaKnown RBP17.57■□□□□ 0.4
BRF1-208ENST00000546997 E7EVH7 732 aa17.56■□□□□ 0.4
BRF1-208ENST00000546997 SGPL1O95470 568 aa17.56■□□□□ 0.4
BRF1-208ENST00000546997 CDK7P50613 346 aa17.56■□□□□ 0.4
BRF1-208ENST00000546997 SLC8A3P57103 927 aa17.56■□□□□ 0.4
BRF1-208ENST00000546997 MYL7Q01449 175 aa17.56■□□□□ 0.4
BRF1-208ENST00000546997 PSMD6Q15008 389 aa17.56■□□□□ 0.4
BRF1-208ENST00000546997 PCBP1Q15365 356 aaKnown RBP eCLIP17.56■□□□□ 0.4
BRF1-208ENST00000546997 BRSK2Q8IWQ3 736 aa17.56■□□□□ 0.4
BRF1-208ENST00000546997 TMC2Q8TDI7 906 aa17.56■□□□□ 0.4
BRF1-208ENST00000546997 ISCUQ9H1K1 167 aa17.56■□□□□ 0.4
BRF1-208ENST00000546997 SLC12A6Q9UHW9 1150 aa17.56■□□□□ 0.4
BRF1-208ENST00000546997 PIN4Q9Y237 131 aaKnown RBP17.56■□□□□ 0.4
BRF1-208ENST00000546997 BHMG1C9JSJ3 638 aaPredicted RBP17.55■□□□□ 0.4
BRF1-208ENST00000546997 LRRN2O75325 713 aa17.55■□□□□ 0.4
BRF1-208ENST00000546997 MYZAPP0CAP1 466 aa17.55■□□□□ 0.4
BRF1-208ENST00000546997 MCF2P10911 925 aa17.55■□□□□ 0.4
BRF1-208ENST00000546997 GUCY2DQ02846 1103 aa17.55■□□□□ 0.4
BRF1-208ENST00000546997 MTMR3Q13615 1198 aa17.55■□□□□ 0.4
BRF1-208ENST00000546997 N4BP2L2Q92802 583 aaPredicted RBP17.55■□□□□ 0.4
BRF1-208ENST00000546997 EIF2AQ9BY44 585 aaKnown RBP17.55■□□□□ 0.4
BRF1-208ENST00000546997 TMEM117Q9H0C3 514 aa17.55■□□□□ 0.4
BRF1-208ENST00000546997 RALGAPA2Q2PPJ7 1873 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms