RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 NIPA1Q7RTP0 329 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 OR6P1Q8NGX9 317 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 C1orf54Q8WWF1 131 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 PABPC5Q96DU9 382 aaKnown RBP9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 TINF2Q9BSI4 451 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 CLCA2Q9UQC9 943 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 ABCC6O95255 1503 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 GRID2IPA4D2P6 1211 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 HSPA4LO95757 839 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 MAP4P27816 1152 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 ZNF177Q13360 481 aaPredicted RBP9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 CELF3Q5SZQ8 465 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 THEMIS2Q5TEJ8 643 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 VGLL2Q8N8G2 317 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 FAM163AQ96GL9 167 aaPredicted RBP9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 DDX27Q96GQ7 796 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 CGRRF1Q99675 332 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 HTATIP2Q9BUP3 242 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 F5H5T6 163 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 AXLP30530 894 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 KPNA1P52294 538 aaPredicted RBP9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 FMR1Q06787 632 aaKnown RBP eCLIP9.5□□□□□ -0.891e-6■■■□□ 16.7
MTHFD1-202ENST00000545908 SFSWAPQ12872 951 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 STK4Q13043 487 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 KLHL38Q2WGJ6 581 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 TREML2Q5T2D2 321 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 ZNF410Q86VK4 478 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.5□□□□□ -0.894e-8■■■□□ 16.4
MTHFD1-202ENST00000545908 WDCPQ9H6R7 721 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 FHOD1Q9Y613 1164 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 RASGRF2O14827 1237 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 NCF2P19878 526 aaPredicted RBP9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 AKAP5P24588 427 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 ARHGAP25P42331 645 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 FBXW4P57775 412 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 DGKZQ13574 1117 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 RNF135Q8IUD6 432 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 CERS5Q8N5B7 392 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 MRPL9Q9BYD2 267 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 TMEM117Q9H0C3 514 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 ZFYVE1Q9HBF4 777 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 DLG5Q8TDM6 1919 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 AP3B1O00203 1094 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 UCHL3P15374 230 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 ARSEP51690 589 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 PHEXP78562 749 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 ADCY2Q08462 1091 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 ULK4Q96C45 1275 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 CLMNQ96JQ2 1002 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 OSBPL9Q96SU4 736 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 ZBTB18Q99592 522 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 MKNK1Q9BUB5 465 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 TRIM55Q9BYV6 548 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 VPS11Q9H270 941 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 ZNF212Q9UDV6 495 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 COPEO14579 308 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 COPS2P61201 443 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 POU5F1BQ06416 359 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 C6orf118Q5T5N4 469 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 ACOT1Q86TX2 421 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 WDR49Q8IV35 697 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 PPP1R2P1Q96PQ5 205 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 PDGFDQ9GZP0 370 aaPredicted RBP9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 SYNPO2Q9UMS6 1093 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 SNX24Q9Y343 169 aa9.5□□□□□ -0.89
MTHFD1-202ENST00000545908 ZNF500O60304 480 aaPredicted RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 HSPA8P11142 646 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 MX2P20592 715 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 TWF1Q12792 350 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 GIT2Q14161 759 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 ARID5BQ14865 1188 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 HP1BP3Q5SSJ5 553 aaPredicted RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 SPATA17Q96L03 361 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 AGAP3Q96P47 875 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 RRAGDQ9NQL2 400 aaPredicted RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 GTSE1Q9NYZ3 720 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 FBXL21Q9UKT6 434 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 ITGA11Q9UKX5 1188 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 SMIM24O75264 130 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 SEC31AO94979 1220 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 ACADMP11310 421 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 KLK7P49862 253 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 GJB7Q6PEY0 223 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 ANKRD23Q86SG2 305 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 ILDR1Q86SU0 546 aaPredicted RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 THG1LQ9NWX6 298 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 NFU1Q9UMS0 254 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 WTIPA6NIX2 430 aaPredicted RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 CSDE1O75534 798 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 KRT37O76014 449 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 LGALS2P05162 132 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 PDIA2Q13087 525 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 SLC25A41Q8N5S1 370 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 TBC1D19Q8N5T2 526 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 SCFD1Q8WVM8 642 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 KIF2CQ99661 725 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 C3orf70A6NLC5 250 aaPredicted RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 CHRNA3P32297 505 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms