RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 C1orf127Q8N9H9 656 aa16.96■□□□□ 0.31
CCDC78-216ENST00000544996 MTMR12Q9C0I1 747 aa16.96■□□□□ 0.31
CCDC78-216ENST00000544996 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.96■□□□□ 0.31
CCDC78-216ENST00000544996 LIMD1Q9UGP4 676 aa16.96■□□□□ 0.31
CCDC78-216ENST00000544996 AFF4Q9UHB7 1163 aaKnown RBP16.96■□□□□ 0.31
CCDC78-216ENST00000544996 HOOK1Q9UJC3 728 aaKnown RBP16.96■□□□□ 0.31
CCDC78-216ENST00000544996 PLXNA3P51805 1871 aa16.96■□□□□ 0.31
CCDC78-216ENST00000544996 PDCD11Q14690 1871 aaKnown RBP16.96■□□□□ 0.31
CCDC78-216ENST00000544996 PDXKO00764 312 aa16.95■□□□□ 0.3
CCDC78-216ENST00000544996 GPR37L1O60883 481 aa16.95■□□□□ 0.3
CCDC78-216ENST00000544996 DLATP10515 647 aaKnown RBP16.95■□□□□ 0.3
CCDC78-216ENST00000544996 TNNI1P19237 187 aa16.95■□□□□ 0.3
CCDC78-216ENST00000544996 FSHRP23945 695 aa16.95■□□□□ 0.3
CCDC78-216ENST00000544996 ADCY1Q08828 1119 aa16.95■□□□□ 0.3
CCDC78-216ENST00000544996 MYO1EQ12965 1108 aa16.95■□□□□ 0.3
CCDC78-216ENST00000544996 MYBPC2Q14324 1141 aa16.95■□□□□ 0.3
CCDC78-216ENST00000544996 KCNB1Q14721 858 aa16.95■□□□□ 0.3
CCDC78-216ENST00000544996 PTPN21Q16825 1174 aa16.95■□□□□ 0.3
CCDC78-216ENST00000544996 GRASPQ7Z6J2 395 aaPredicted RBP16.95■□□□□ 0.3
CCDC78-216ENST00000544996 CCDC127Q96BQ5 260 aa16.95■□□□□ 0.3
CCDC78-216ENST00000544996 VWA8A3KMH1 1905 aa16.95■□□□□ 0.3
CCDC78-216ENST00000544996 CYP24A1Q07973 514 aa16.94■□□□□ 0.3
CCDC78-216ENST00000544996 BFSP1Q12934 665 aa16.94■□□□□ 0.3
CCDC78-216ENST00000544996 GPR17Q13304 367 aa16.94■□□□□ 0.3
CCDC78-216ENST00000544996 PSMD6Q15008 389 aa16.94■□□□□ 0.3
CCDC78-216ENST00000544996 WSCD1Q658N2 575 aa16.94■□□□□ 0.3
CCDC78-216ENST00000544996 LMBRD2Q68DH5 695 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-216ENST00000544996 GET4Q7L5D6 327 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-216ENST00000544996 ELMOD1Q8N336 334 aa16.94■□□□□ 0.3
CCDC78-216ENST00000544996 EDAQ92838 391 aa16.94■□□□□ 0.3
CCDC78-216ENST00000544996 BORCS6Q96GS4 357 aa16.94■□□□□ 0.3
CCDC78-216ENST00000544996 RMND1Q9NWS8 449 aa16.94■□□□□ 0.3
CCDC78-216ENST00000544996 CHMP5Q9NZZ3 219 aa16.94■□□□□ 0.3
CCDC78-216ENST00000544996 SORCS3Q9UPU3 1222 aa16.94■□□□□ 0.3
CCDC78-216ENST00000544996 C5orf42Q9H799 3197 aa16.94■□□□□ 0.3
CCDC78-216ENST00000544996 CALUO43852 315 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-216ENST00000544996 HUS1O60921 280 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 SMC2O95347 1197 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 OR4Q2P0C623 313 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 ZXDAP98168 799 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 SNW1Q13573 536 aaKnown RBP16.93■□□□□ 0.3
CCDC78-216ENST00000544996 MTMR3Q13615 1198 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 RNF19BQ6ZMZ0 732 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 SLC9A9Q8IVB4 645 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 ENGASEQ8NFI3 743 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 OR5B17Q8NGF7 314 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 TMEM174Q8WUU8 243 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 MFSD14AQ96MC6 490 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 TIGD1Q96MW7 591 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 CGRRF1Q99675 332 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 KCTD10Q9H3F6 313 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 SIX4Q9UIU6 781 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 INSL5Q9Y5Q6 135 aa16.93■□□□□ 0.3
CCDC78-216ENST00000544996 ZFP37Q9Y6Q3 630 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-216ENST00000544996 FAM86C2PA6NEL3 165 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 SEC24AO95486 1093 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 NR3C1P04150 777 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 PTPN2P17706 415 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 PLD1Q13393 1074 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 PNOCQ13519 176 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 PABPC1LQ4VXU2 614 aaKnown RBP16.92■□□□□ 0.3
CCDC78-216ENST00000544996 IQCEQ6IPM2 695 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 TRAPPC11Q7Z392 1133 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 UBALD2Q8IYN6 164 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 TMEM86AQ8N2M4 240 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 GUF1Q8N442 669 aaKnown RBP16.92■□□□□ 0.3
CCDC78-216ENST00000544996 CXorf38Q8TB03 319 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 HPDLQ96IR7 371 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 FAM84AQ96KN4 292 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 ZNF512Q96ME7 567 aaPredicted RBP16.92■□□□□ 0.3
CCDC78-216ENST00000544996 PGLYRP2Q96PD5 576 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 LRFN3Q9BTN0 628 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 DMAC2Q9NW81 257 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 GDAP2Q9NXN4 497 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 EPS15L1Q9UBC2 864 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 DNMT3BQ9UBC3 853 aaKnown RBP16.92■□□□□ 0.3
CCDC78-216ENST00000544996 MAPK8IP1Q9UQF2 711 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 FRMD4BQ9Y2L6 1034 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 SNX9Q9Y5X1 595 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 PTPRJQ12913 1337 aa16.92■□□□□ 0.3
CCDC78-216ENST00000544996 PRR33A8MZF0 331 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 KINO60870 393 aaKnown RBP16.91■□□□□ 0.3
CCDC78-216ENST00000544996 N4BP1O75113 896 aaKnown RBP16.91■□□□□ 0.3
CCDC78-216ENST00000544996 ASGR2P07307 311 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 LAMP2P13473 410 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 AP3M2P53677 418 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 NTHL1P78549 312 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 TWF1Q12792 350 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 SMARCB1Q12824 385 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 DUSP4Q13115 394 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 TRIM67Q6ZTA4 783 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 TOP6BLQ8N6T0 577 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 OR10T2Q8NGX3 314 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 SPATA18Q8TC71 538 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 SMARCE1Q969G3 411 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 GSDMAQ96QA5 445 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 MYADMQ96S97 322 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 GTPBP4Q9BZE4 634 aaKnown RBP16.91■□□□□ 0.3
CCDC78-216ENST00000544996 ZCWPW1Q9H0M4 648 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 C11orf16Q9NQ32 467 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms