RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 SMG8Q8ND04 991 aaKnown RBP5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 CTCFLQ8NI51 663 aaPredicted RBP5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 CRYGNQ8WXF5 182 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 RILPL2Q969X0 211 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 FAM129BQ96TA1 746 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 NAP1L4Q99733 375 aaKnown RBP5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 LZTS2Q9BRK4 669 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 COLEC11Q9BWP8 271 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 ANO3Q9BYT9 981 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 INO80BQ9C086 356 aaPredicted RBP5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 IL25Q9H293 177 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 BRD9Q9H8M2 597 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 IFT122Q9HBG6 1241 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 ZNF334Q9HCZ1 680 aaPredicted RBP5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 VPS45Q9NRW7 570 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 NRBP2Q9NSY0 501 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 RBM12Q9NTZ6 932 aaKnown RBP5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 TBC1D22BQ9NU19 505 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 AGPAT5Q9NUQ2 364 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 CACNA2D2Q9NY47 1150 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 ANKFY1Q9P2R3 1169 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 GGT7Q9UJ14 662 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 STRIP2Q9ULQ0 834 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 POLIQ9UNA4 740 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 MSRB2Q9Y3D2 182 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 MRPS23Q9Y3D9 190 aaKnown RBP5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 NEUROG3Q9Y4Z2 214 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 TAF6LQ9Y6J9 622 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 PIAS3Q9Y6X2 628 aa5.4□□□□□ -1.54
NPIPB4-219ENST00000543660 COL4A2P08572 1712 aa5.4□□□□□ -1.55
NPIPB4-219ENST00000543660 HYAL3O43820 417 aaPredicted RBP5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 RPP40O75818 363 aaKnown RBP5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 DDAH1O94760 285 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 DKK1O94907 266 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 STBD1O95210 358 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 RHOP08100 348 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 CELA2BP08218 269 aaPredicted RBP5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 CYP21A2P08686 494 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 CEBPBP17676 345 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 CSRP1P21291 193 aaKnown RBP5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 MLH1P40692 756 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 GNAQP50148 359 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 SCNN1GP51170 649 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 MLLT6P55198 1093 aaPredicted RBP5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 HNRNPUQ00839 825 aaKnown RBP eCLIP5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 PRKCEQ02156 737 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 TRDNQ13061 729 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 SERINC3Q13530 473 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 BRD3Q15059 726 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 UGCGQ16739 394 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 UVSSAQ2YD98 709 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 FAM78AQ5JUQ0 283 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 AXDND1Q5T1B0 1012 aaPredicted RBP5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 KIAA1211LQ6NV74 962 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 HEATR3Q7Z4Q2 680 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 RHPN2Q8IUC4 686 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 GPATCH11Q8N954 259 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 GSTCDQ8NEC7 633 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 LNX1Q8TBB1 728 aaPredicted RBP5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 SLC7A14Q8TBB6 771 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 ADAM32Q8TC27 787 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 GAB3Q8WWW8 586 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 RABGGTAQ92696 567 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 ZC3H10Q96K80 434 aaKnown RBP5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 GAD1Q99259 594 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 ZNF577Q9BSK1 485 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 EDEM2Q9BV94 578 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 TRMT61BQ9BVS5 477 aaKnown RBP5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 MINDY3Q9H8M7 445 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 ZFP14Q9HCL3 533 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 UBN1Q9NPG3 1134 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 RIC8AQ9NPQ8 531 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 AVENQ9NQS1 362 aaPredicted RBP5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 SUCLA2Q9P2R7 463 aaPredicted RBP5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 ADAM28Q9UKQ2 775 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 KLK13Q9UKR3 277 aa5.39□□□□□ -1.55
NPIPB4-219ENST00000543660 GON4LQ3T8J9 2241 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 URB1O60287 2271 aaKnown RBP5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 CCDC163A0A0D9SF12 145 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 LNP1A1A4G5 178 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 FAM221BA6H8Z2 402 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 TMEM150BA6NC51 233 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 WDR64B1ANS9 1081 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 E7EWF7 191 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 CDX4O14627 284 aaPredicted RBP5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 EXTL3O43909 919 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 CYP3A4P08684 503 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 ITGA4P13612 1032 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 PSMC3P17980 439 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 PAX3P23760 479 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 GDI1P31150 447 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 PXNP49023 591 aaPredicted RBP5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 DHX9Q08211 1270 aaKnown RBP5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 CBLBQ13191 982 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 AP3B2Q13367 1082 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 RAB33AQ14088 237 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 LRRC32Q14392 662 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 SART3Q15020 963 aaKnown RBP5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 COL28A1Q2UY09 1125 aa5.38□□□□□ -1.55
NPIPB4-219ENST00000543660 PLK5Q496M5 336 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms