RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 SOAT2O75908 522 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 PRKD3O94806 890 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 SUN1O94901 812 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 EYA4O95677 639 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 RPLP2P05387 115 aaKnown RBP3.18□□□□□ -1.9
KNTC1-213ENST00000542727 PPP3CBP16298 524 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 KRTAP10-9P60411 292 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 ERVK-21P61565 698 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 EXOSC10Q01780 885 aaKnown RBP3.18□□□□□ -1.9
KNTC1-213ENST00000542727 CD300EQ496F6 205 aaPredicted RBP3.18□□□□□ -1.9
KNTC1-213ENST00000542727 UTP14CQ5TAP6 766 aaKnown RBP3.18□□□□□ -1.9
KNTC1-213ENST00000542727 TMPRSS9Q7Z410 1059 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 DCBLD1Q8N8Z6 715 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 PDPRQ8NCN5 879 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 COG1Q8WTW3 980 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 HDAC10Q969S8 669 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 OSBPL9Q96SU4 736 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 TLR10Q9BXR5 811 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 CALCOCO1Q9P1Z2 691 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 MCM8Q9UJA3 840 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 PADI4Q9UM07 663 aa3.18□□□□□ -1.9
KNTC1-213ENST00000542727 KCNAB3O43448 404 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 TRIAP1O43715 76 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 CHRM2P08172 466 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 VIL1P09327 827 aaKnown RBP3.17□□□□□ -1.9
KNTC1-213ENST00000542727 POU3F3P20264 500 aaPredicted RBP3.17□□□□□ -1.9
KNTC1-213ENST00000542727 CERS1P27544 350 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 SLC6A4P31645 630 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 NPTX2P47972 431 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 TUBA4AP68366 448 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 AMPD3Q01432 767 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 EIF2B5Q13144 721 aaKnown RBP3.17□□□□□ -1.9
KNTC1-213ENST00000542727 GRM1Q13255 1194 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 KLF1Q13351 362 aaPredicted RBP3.17□□□□□ -1.9
KNTC1-213ENST00000542727 TEDDM1Q5T9Z0 273 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 PPP4R3AQ6IN85 833 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 AMIGO2Q86SJ2 522 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 PDSS2Q86YH6 399 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 CFAP52Q8N1V2 620 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 VGLL2Q8N8G2 317 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 IFI44Q8TCB0 444 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 NRG4Q8WWG1 115 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 TMX3Q96JJ7 454 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 KLHL32Q96NJ5 620 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 SMOQ99835 787 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 NRIP3Q9NQ35 241 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 MAN1C1Q9NR34 630 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 RLIMQ9NVW2 624 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 EHD3Q9NZN3 535 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.17□□□□□ -1.9
KNTC1-213ENST00000542727 INTUQ9ULD6 942 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 ATP8A1Q9Y2Q0 1164 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 COL4A3BPQ9Y5P4 624 aa3.17□□□□□ -1.9
KNTC1-213ENST00000542727 A0A0B4J269 797 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 NXPH3O95157 252 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 BMP15O95972 392 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 CHEK2O96017 543 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 ELFN1P0C7U0 828 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 HOXB6P17509 224 aaKnown RBP3.16□□□□□ -1.9
KNTC1-213ENST00000542727 CDK11BP21127 795 aaKnown RBP3.16□□□□□ -1.9
KNTC1-213ENST00000542727 IBSPP21815 317 aaPredicted RBP3.16□□□□□ -1.9
KNTC1-213ENST00000542727 DRD4P21917 467 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 CDKN1CP49918 316 aaPredicted RBP3.16□□□□□ -1.9
KNTC1-213ENST00000542727 GUCY2FP51841 1108 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 TUBB3Q13509 450 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 PTPROQ16827 1216 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 SLC44A4Q53GD3 710 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 MORN5Q5VZ52 161 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 CEP85Q6P2H3 762 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 TSHZ1Q6ZSZ6 1077 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 DDB2Q92466 427 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 RPL36ALQ969Q0 106 aaKnown RBP3.16□□□□□ -1.9
KNTC1-213ENST00000542727 KRTAP1-5Q9BYS1 174 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 SIK2Q9H0K1 926 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 PCDH12Q9NPG4 1184 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 GNL3LQ9NVN8 582 aaKnown RBP3.16□□□□□ -1.9
KNTC1-213ENST00000542727 SIDT1Q9NXL6 827 aaKnown RBP3.16□□□□□ -1.9
KNTC1-213ENST00000542727 SLC5A4Q9NY91 659 aa3.16□□□□□ -1.9
KNTC1-213ENST00000542727 PHLDB1Q86UU1 1377 aa3.15□□□□□ -1.9
KNTC1-213ENST00000542727 LATS1O95835 1130 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 CD1AP06126 327 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 PRR35P0CG20 571 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 KELP23276 732 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 CCT8P50990 548 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 ITKQ08881 620 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 TARDBPQ13148 414 aaKnown RBP eCLIP3.15□□□□□ -1.91
KNTC1-213ENST00000542727 BMPR2Q13873 1038 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 MTX3Q5HYI7 312 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 C11orf87Q6NUJ2 197 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 TAPT1Q6NXT6 567 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 GADL1Q6ZQY3 521 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 ZNF804AQ7Z570 1209 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 NEK8Q86SG6 692 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 RASAL3Q86YV0 1011 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 FAM9AQ8IZU1 332 aaPredicted RBP3.15□□□□□ -1.91
KNTC1-213ENST00000542727 CNTD1Q8N815 330 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 PRPF38AQ8NAV1 312 aaKnown RBP3.15□□□□□ -1.91
KNTC1-213ENST00000542727 POC1BQ8TC44 478 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 ATRIPQ8WXE1 791 aa3.15□□□□□ -1.91
KNTC1-213ENST00000542727 TBC1D5Q92609 795 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms