RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 SMARCB1Q12824 385 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 GRSF1Q12849 480 aaKnown RBP eCLIP9.74□□□□□ -0.85
UBC-211ENST00000542416 DUSP4Q13115 394 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 SRSF5Q13243 272 aaKnown RBP9.74□□□□□ -0.85
UBC-211ENST00000542416 NOLC1Q14978 699 aaKnown RBP eCLIP9.74□□□□□ -0.854e-29■■□□□ 11.8
UBC-211ENST00000542416 VEPH1Q14D04 833 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 PON2Q15165 354 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 ZNF174Q15697 407 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 ME3Q16798 604 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 SLC10A6Q3KNW5 377 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 ITPRIPL2Q3MIP1 535 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 N4BP2L1Q5TBK1 243 aaPredicted RBP9.74□□□□□ -0.85
UBC-211ENST00000542416 KRT79Q5XKE5 535 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 CENPPQ6IPU0 288 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 ZPBP2Q6X784 338 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 DSTYKQ6XUX3 929 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 Q6ZS52 159 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 DNAJB7Q7Z6W7 309 aaPredicted RBP9.74□□□□□ -0.85
UBC-211ENST00000542416 TMC8Q8IU68 726 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 CAMKK1Q8N5S9 505 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 KCTD17Q8N5Z5 321 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 NECAB1Q8N987 351 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 BPIFB1Q8TDL5 484 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 SPIRE2Q8WWL2 714 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 TMEM209Q96SK2 561 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 LRRC3Q9BY71 257 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 ARRDC1-AS1Q9H2J1 176 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 TASP1Q9H6P5 420 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 VPS45Q9NRW7 570 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 DDX19AQ9NUU7 478 aaKnown RBP9.74□□□□□ -0.85
UBC-211ENST00000542416 UBQLN1Q9UMX0 589 aaKnown RBP9.74□□□□□ -0.85
UBC-211ENST00000542416 NOL7Q9UMY1 257 aaKnown RBP9.74□□□□□ -0.85
UBC-211ENST00000542416 SLC8A2Q9UPR5 921 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 COL4A3Q01955 1670 aa9.74□□□□□ -0.85
UBC-211ENST00000542416 PATJQ8NI35 1801 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 SOBPA7XYQ1 873 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 ABLIM1O14639 778 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 TM4SF5O14894 197 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 AXIN1O15169 862 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 HARSP12081 509 aaKnown RBP9.73□□□□□ -0.85
UBC-211ENST00000542416 SCP2P22307 547 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 SOX9P48436 509 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 AARSP49588 968 aaKnown RBP eCLIP9.73□□□□□ -0.85
UBC-211ENST00000542416 MCM2P49736 904 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 MCL1Q07820 350 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 GNL2Q13823 731 aaKnown RBP9.73□□□□□ -0.85
UBC-211ENST00000542416 TAF12Q16514 161 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 FBXO43Q4G163 708 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 TTC38Q5R3I4 469 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 GPR158Q5T848 1215 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 STPG1Q5TH74 334 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 OVOS1Q6IE37 1185 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 TXNDC11Q6PKC3 985 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 CCDC26Q8TAB7 109 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 SNX29Q8TEQ0 813 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 KIF12Q96FN5 646 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 C8orf76Q96K31 380 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 ZC3H10Q96K80 434 aaKnown RBP9.73□□□□□ -0.85
UBC-211ENST00000542416 PGLYRP2Q96PD5 576 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 LSM14BQ9BX40 385 aaKnown RBP9.73□□□□□ -0.85
UBC-211ENST00000542416 DNAJC25Q9H1X3 360 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 POLD4Q9HCU8 107 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 GTSE1Q9NYZ3 720 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 ANKFY1Q9P2R3 1169 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 ZFHX4Q86UP3 3567 aa9.73□□□□□ -0.85
UBC-211ENST00000542416 USP24Q9UPU5 2620 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 NOTCH4Q99466 2003 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 LAD1O00515 517 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 TRDMT1O14717 391 aaKnown RBP9.72□□□□□ -0.85
UBC-211ENST00000542416 RHOBTB1O94844 696 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 KCNK5O95279 499 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 PROS1P07225 676 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 ODC1P11926 461 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 GUCY2CP25092 1073 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 GABRR2P28476 465 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 MATR3P43243 847 aaKnown RBP eCLIP9.72□□□□□ -0.85
UBC-211ENST00000542416 PPP2R3AQ06190 1150 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 KARSQ15046 597 aaKnown RBP9.72□□□□□ -0.85
UBC-211ENST00000542416 SF3A2Q15428 464 aaKnown RBP9.72□□□□□ -0.85
UBC-211ENST00000542416 ELF2Q15723 593 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 ECM1Q16610 540 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 TMEM196Q5HYL7 178 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 PLA2G2CQ5R387 149 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 RINT1Q6NUQ1 792 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 GAREM2Q75VX8 874 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 TAS1R3Q7RTX0 852 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 C11orf74Q86VG3 221 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 CD302Q8IX05 232 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 IGSF22Q8N9C0 903 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 ATAD1Q8NBU5 361 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 C2orf15Q8WU43 125 aaKnown RBP9.72□□□□□ -0.85
UBC-211ENST00000542416 RSPRY1Q96DX4 576 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 KCND2Q9NZV8 630 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 DSEQ9UL01 958 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 NCANO14594 1321 aa9.72□□□□□ -0.85
UBC-211ENST00000542416 CFAP47Q6ZTR5 3102 aa9.71□□□□□ -0.85
UBC-211ENST00000542416 TTC26A0AVF1 554 aa9.71□□□□□ -0.86
UBC-211ENST00000542416 MTMR11A4FU01 709 aa9.71□□□□□ -0.86
UBC-211ENST00000542416 SLC16A4O15374 487 aa9.71□□□□□ -0.86
UBC-211ENST00000542416 EXTL3O43909 919 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms