RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 NENFQ9UMX5 172 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 A0A1B0GUA9 196 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 LACTBL1A8MY62 500 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 NFICP08651 508 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 ABCB4P21439 1286 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 FAM47CQ5HY64 1035 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 RNF187Q5TA31 235 aaPredicted RBP16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 CD302Q8IX05 232 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 MREGQ8N565 214 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 ATP6V1G3Q96LB4 118 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 RNF14Q9UBS8 474 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 MDH1P40925 334 aaKnown RBP16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 MYL6P60660 151 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 NBPF20Q3BBV1 942 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 C10orf76Q5T2E6 689 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 EMC10Q5UCC4 262 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 NLRP14Q86W24 1093 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 ADPGKQ9BRR6 497 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 MTG1Q9BT17 334 aaPredicted RBP16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 NOCTQ9UK39 431 aaKnown RBP16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 NPTXRO95502 500 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 MMEP08473 750 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 KRT19P08727 400 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 H2AFZP0C0S5 128 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 CYP11B1P15538 503 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 ANXA13P27216 316 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 HOXA11P31270 313 aaPredicted RBP16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 GALCP54803 685 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 SURF1Q15526 300 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 JADE1Q6IE81 842 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 MICALCLQ6ZW33 695 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 H2AFVQ71UI9 128 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 REM2Q8IYK8 340 aaPredicted RBP16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 MYCBPAPQ8TBZ2 947 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 IMPG2Q9BZV3 1241 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 SRRDQ9UH36 339 aa16.29■□□□□ 0.2
CLPTM1-202ENST00000541297 CLTAP09496 248 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 DARSP14868 501 aaKnown RBP16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 CHRNB2P17787 502 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 PDE6CP51160 858 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 AP3M2P53677 418 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 TRPC3Q13507 836 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 CUL2Q13617 745 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 CEP85LQ5SZL2 805 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 MAATS1Q7Z4T9 603 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 ANKRD36BP1Q96IX9 119 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 PLAAQ9Y263 795 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 B4GALT4O60513 344 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 ADAMTS4O75173 837 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 TNNC2P02585 160 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 EIF4BP23588 611 aaKnown RBP16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 HPDP32754 393 aaPredicted RBP16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 SLC10A6Q3KNW5 377 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 ENOSF1Q7L5Y1 443 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 YTHDF3Q7Z739 585 aaKnown RBP16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 PCDHB18PQ96TA0 734 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 EIF2AQ9BY44 585 aaKnown RBP16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 HES2Q9Y543 173 aa16.28■□□□□ 0.2
CLPTM1-202ENST00000541297 E7EVH7 732 aa16.27■□□□□ 0.2
CLPTM1-202ENST00000541297 RAD51CO43502 376 aa16.27■□□□□ 0.2
CLPTM1-202ENST00000541297 ASGR1P07306 291 aa16.27■□□□□ 0.2
CLPTM1-202ENST00000541297 GNAT1P11488 350 aa16.27■□□□□ 0.2
CLPTM1-202ENST00000541297 MAP2K2P36507 400 aa16.27■□□□□ 0.2
CLPTM1-202ENST00000541297 IFT88Q13099 833 aa16.27■□□□□ 0.2
CLPTM1-202ENST00000541297 SNX17Q15036 470 aa16.27■□□□□ 0.2
CLPTM1-202ENST00000541297 PTPROQ16827 1216 aa16.27■□□□□ 0.2
CLPTM1-202ENST00000541297 GDF6Q6KF10 455 aaPredicted RBP16.27■□□□□ 0.2
CLPTM1-202ENST00000541297 KLHL7Q8IXQ5 586 aa16.27■□□□□ 0.2
CLPTM1-202ENST00000541297 CXCL16Q9H2A7 254 aa16.27■□□□□ 0.2
CLPTM1-202ENST00000541297 CENPHQ9H3R5 247 aa16.27■□□□□ 0.2
CLPTM1-202ENST00000541297 GOLPH3Q9H4A6 298 aa16.27■□□□□ 0.2
CLPTM1-202ENST00000541297 IL18RAPO95256 599 aa16.27■□□□□ 0.19
CLPTM1-202ENST00000541297 ASS1P00966 412 aaKnown RBP16.27■□□□□ 0.19
CLPTM1-202ENST00000541297 CDC42EP1Q00587 391 aa16.27■□□□□ 0.19
CLPTM1-202ENST00000541297 KCNA10Q16322 511 aa16.27■□□□□ 0.19
CLPTM1-202ENST00000541297 TMEM270Q6UE05 265 aa16.27■□□□□ 0.19
CLPTM1-202ENST00000541297 SCARA5Q6ZMJ2 495 aa16.27■□□□□ 0.19
CLPTM1-202ENST00000541297 RAET1EQ8TD07 263 aa16.27■□□□□ 0.19
CLPTM1-202ENST00000541297 WHAMMQ8TF30 809 aa16.27■□□□□ 0.19
CLPTM1-202ENST00000541297 ACAP3Q96P50 834 aa16.27■□□□□ 0.19
CLPTM1-202ENST00000541297 UPF3AQ9H1J1 476 aaKnown RBP16.27■□□□□ 0.19
CLPTM1-202ENST00000541297 PPANQ9NQ55 473 aaKnown RBP16.27■□□□□ 0.19
CLPTM1-202ENST00000541297 PCDHB4Q9Y5E5 795 aa16.27■□□□□ 0.19
CLPTM1-202ENST00000541297 HMGB1P1B2RPK0 211 aaPredicted RBP16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 CD58P19256 250 aa16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 YY1P25490 414 aa16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 SSTR3P32745 418 aaPredicted RBP16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 FMO1Q01740 532 aa16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 MEI1Q5TIA1 1274 aa16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 THAP2Q9H0W7 228 aa16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 RNF19AQ9NV58 838 aa16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 SNTG2Q9NY99 539 aa16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 GTF2IRD1Q9UHL9 959 aa16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 PIN4Q9Y237 131 aaKnown RBP16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 GRID2IPA4D2P6 1211 aa16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 KPNA6O60684 536 aa16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 FAM107AO95990 144 aa16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 ACO1P21399 889 aaKnown RBP16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 HOXC8P31273 242 aa16.26■□□□□ 0.19
CLPTM1-202ENST00000541297 EP400NLQ6ZTU2 488 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms