RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PCK1P35558 622 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 SLC8A3P57103 927 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZNF252P-AS1Q0IIN9 211 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 SETDB1Q15047 1291 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 KHDC1Q4VXA5 237 aaKnown RBP10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 ANO7Q6IWH7 933 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 MON1BQ7L1V2 547 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 TAS1R3Q7RTX0 852 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 CROCCP2Q86T23 111 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 NLRX1Q86UT6 975 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 LRRC6Q86X45 466 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 GBP7Q8N8V2 638 aaPredicted RBP10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 LRRC8CQ8TDW0 803 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 DENND1AQ8TEH3 1009 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 C10orf82Q8WW14 230 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 WDR83Q9BRX9 315 aaKnown RBP10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 C1orf112Q9NSG2 853 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 ARMCX1Q9P291 453 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 TCEAL9Q9UHQ7 104 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 PCDHB4Q9Y5E5 795 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 C10orf71Q711Q0 1435 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZNF541Q9H0D2 1346 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 CFAP69A5D8W1 941 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 HLA-DRAP01903 254 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 GNAZP19086 355 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 PTDSS1P48651 473 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 GPX6P59796 221 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 ORC1Q13415 861 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 SMAD1Q15797 465 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 WDR72Q3MJ13 1102 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 GNPTABQ3T906 1256 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 HHATQ5VTY9 493 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 ANKRD35Q8N283 1001 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 CCHCR1Q8TD31 782 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 KIFAP3Q92845 792 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 RNPEPL1Q9HAU8 725 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 KCND2Q9NZV8 630 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 ANKFY1Q9P2R3 1169 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 DOCK5Q9H7D0 1870 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 SGK1O00141 431 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 P4HA2O15460 535 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 EDF1O60869 148 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 HIRAP54198 1017 aaPredicted RBP10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 NFX1Q12986 1120 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 FNBP1LQ5T0N5 605 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 NLRP9Q7RTR0 991 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 PODNQ7Z5L7 613 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 CCDC125Q86Z20 511 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 CCDC89Q8N998 374 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 SHKBP1Q8TBC3 707 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 CNKSR1Q969H4 720 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZNF668Q96K58 619 aaPredicted RBP10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 CEP170P1Q96L14 293 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 MCEEQ96PE7 176 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 SMC6Q96SB8 1091 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 PLVAPQ9BX97 442 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 HAPLN2Q9GZV7 340 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZNF395Q9H8N7 513 aaPredicted RBP10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 ARL8BQ9NVJ2 186 aa10.95□□□□□ -0.66
CDC42SE1-207ENST00000540998 UBR3Q6ZT12 1888 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 LRRD1A4D1F6 860 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 KLRG2A4D1S0 409 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 LIASO43766 372 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 KRT36O76013 467 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 MAP3K6O95382 1288 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 VNN1O95497 513 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 NCKAP1LP55160 1127 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 DMP1Q13316 513 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 SPARCL1Q14515 664 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 STRIP1Q5VSL9 837 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 PPP1R21Q6ZMI0 780 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZCCHC9Q8N567 271 aaKnown RBP10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 PHC3Q8NDX5 983 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 OR5B17Q8NGF7 314 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 FBXO27Q8NI29 283 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 MORC4Q8TE76 937 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 GRK7Q8WTQ7 553 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 CLEC4DQ8WXI8 215 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZNF75CPQ92670 426 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 RIT2Q99578 217 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 SYT15Q9BQS2 421 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZNF341Q9BYN7 854 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZCWPW1Q9H0M4 648 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 LRMDAQ9H2I8 198 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 QSER1Q2KHR3 1735 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 CLUHO75153 1309 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 TTLL13PA6NNM8 815 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 EDN1P05305 212 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 NPR1P16066 1061 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 GNA15P30679 374 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 RPS6P62753 249 aaKnown RBP10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 STAT4Q14765 748 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 CCNG2Q16589 344 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 CDCA2Q69YH5 1023 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 SCARA5Q6ZMJ2 495 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 FMNL3Q8IVF7 1028 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 RHOT1Q8IXI2 618 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 SPDYE1Q8NFV5 336 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 TMEM143Q96AN5 459 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms