RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 COG1Q8WTW3 980 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 C18orf25Q96B23 403 aaPredicted RBP10.19□□□□□ -0.78
PAAF1-209ENST00000540659 CYFIP2Q96F07 1278 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 HPDLQ96IR7 371 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 ZMAT2Q96NC0 199 aaKnown RBP10.19□□□□□ -0.78
PAAF1-209ENST00000540659 TLR10Q9BXR5 811 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 SDCBP2Q9H190 292 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 RNF39Q9H2S5 420 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 SMYD3Q9H7B4 428 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 RNF216Q9NWF9 866 aaPredicted RBP10.19□□□□□ -0.78
PAAF1-209ENST00000540659 SMARCAL1Q9NZC9 954 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 CNOT8Q9UFF9 292 aaKnown RBP10.19□□□□□ -0.78
PAAF1-209ENST00000540659 ITGA11Q9UKX5 1188 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 OGDHLQ9ULD0 1010 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 COG5Q9UP83 839 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 NOD1Q9Y239 953 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 C2CD2Q9Y426 696 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 IPPQ9Y573 584 aa10.19□□□□□ -0.78
PAAF1-209ENST00000540659 PPEF2O14830 753 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 TLR3O15455 904 aaKnown RBP10.18□□□□□ -0.78
PAAF1-209ENST00000540659 BUB1BO60566 1050 aaPredicted RBP10.18□□□□□ -0.78
PAAF1-209ENST00000540659 KIF4AO95239 1232 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 CHRNA1P02708 482 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 UNGP13051 313 aaPredicted RBP10.18□□□□□ -0.78
PAAF1-209ENST00000540659 CD19P15391 556 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 TCP1P17987 556 aaKnown RBP10.18□□□□□ -0.78
PAAF1-209ENST00000540659 ATICP31939 592 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 NSFP46459 744 aaKnown RBP10.18□□□□□ -0.78
PAAF1-209ENST00000540659 ACLYP53396 1101 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 RNASE9P60153 205 aaKnown RBP10.18□□□□□ -0.78
PAAF1-209ENST00000540659 RBP5P82980 135 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 MGAT3Q09327 533 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 MESDQ14696 234 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 RPS6KA1Q15418 735 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 RSRC2Q7L4I2 434 aaKnown RBP10.18□□□□□ -0.78
PAAF1-209ENST00000540659 SERINC5Q86VE9 423 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 NT5DC4Q86YG4 428 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 SYCE1Q8N0S2 351 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 LRRC57Q8N9N7 239 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 SMG8Q8ND04 991 aaKnown RBP10.18□□□□□ -0.78
PAAF1-209ENST00000540659 BEST2Q8NFU1 509 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 CXorf38Q8TB03 319 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 ZNF564Q8TBZ8 553 aaPredicted RBP10.18□□□□□ -0.78
PAAF1-209ENST00000540659 ZNF606Q8WXB4 792 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 MS4A14Q96JA4 679 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 BTBD6Q96KE9 485 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 GLT1D1Q96MS3 346 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 TSPAN18Q96SJ8 248 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 NUP85Q9BW27 656 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 DNAI2Q9GZS0 605 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 PLEKHA5Q9HAU0 1116 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 TRMT13Q9NUP7 481 aaKnown RBP10.18□□□□□ -0.78
PAAF1-209ENST00000540659 AMFRQ9UKV5 643 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 ST3GAL5Q9UNP4 418 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 CNTN6Q9UQ52 1028 aa10.18□□□□□ -0.78
PAAF1-209ENST00000540659 CEP290O15078 2479 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 PDE2AO00408 941 aaPredicted RBP10.17□□□□□ -0.78
PAAF1-209ENST00000540659 KCNK3O14649 394 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 CAND2O75155 1236 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 CYP1A1P04798 512 aaPredicted RBP10.17□□□□□ -0.78
PAAF1-209ENST00000540659 RHOXF2BP0C7M4 288 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 P4HA1P13674 534 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 PRLRP16471 622 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 PAFAH1B1P43034 410 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 MNX1P50219 401 aaPredicted RBP10.17□□□□□ -0.78
PAAF1-209ENST00000540659 ZNF132P52740 706 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 NOMO3P69849 1222 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 LLGL2Q6P1M3 1020 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 DPH6Q7L8W6 267 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 NT5DC3Q86UY8 548 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 CREG2Q8IUH2 290 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 HACE1Q8IYU2 909 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 MCOLN2Q8IZK6 566 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 ANKLE1Q8NAG6 615 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 C1orf131Q8NDD1 294 aaKnown RBP10.17□□□□□ -0.78
PAAF1-209ENST00000540659 ANKRD7Q92527 254 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 RHOXF2Q9BQY4 288 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 C11orf70Q9BRQ4 267 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 BCO2Q9BYV7 579 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 OSBPL7Q9BZF2 842 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 SENP6Q9GZR1 1112 aaPredicted RBP10.17□□□□□ -0.78
PAAF1-209ENST00000540659 GOLGA2P5Q9HBQ8 144 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 CNTN3Q9P232 1028 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 HMGXB4Q9UGU5 601 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 STXBP5LQ9Y2K9 1186 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 DERAQ9Y315 318 aa10.17□□□□□ -0.78
PAAF1-209ENST00000540659 KBTBD13C9JR72 458 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 CYP1A2P05177 515 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 GHRP10912 638 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 ITGA4P13612 1032 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 ZSCAN20P17040 1043 aaPredicted RBP10.16□□□□□ -0.78
PAAF1-209ENST00000540659 CD52P31358 61 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 CENPCQ03188 943 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 MYO1EQ12965 1108 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 PAK2Q13177 524 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 PTK7Q13308 1070 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 ALKAL1Q6UXT8 129 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 TRIM72Q6ZMU5 477 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 MMS22LQ6ZRQ5 1243 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 SLFN11Q7Z7L1 901 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms