RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 DCAF12L1Q5VU92 463 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 CCDC70Q6NSX1 233 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 RASGEF1CQ8N431 466 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 WNT8BQ93098 351 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 VRTNQ9H8Y1 702 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 NOC2LQ9Y3T9 749 aaKnown RBP23.91■■□□□ 1.42
HOMER3-204ENST00000539827 CDY2AQ9Y6F7 541 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 ASGR1P07306 291 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 KCNA10Q16322 511 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 LIN9Q5TKA1 542 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 FAM228AQ86W67 206 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 PHF13Q86YI8 300 aaPredicted RBP23.9■■□□□ 1.42
HOMER3-204ENST00000539827 C1orf131Q8NDD1 294 aaKnown RBP23.9■■□□□ 1.42
HOMER3-204ENST00000539827 HDAC7Q8WUI4 952 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 KRT35Q92764 455 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 C18orf25Q96B23 403 aaPredicted RBP23.9■■□□□ 1.42
HOMER3-204ENST00000539827 TWNKQ96RR1 684 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 RPS6KC1Q96S38 1066 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.9■■□□□ 1.42
HOMER3-204ENST00000539827 TRIM7Q9C029 511 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 RNF39Q9H2S5 420 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 KLK14Q9P0G3 267 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 TUBGCP4Q9UGJ1 667 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 HMGXB4Q9UGU5 601 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 ANAPC7Q9UJX3 599 aa23.9■■□□□ 1.42
HOMER3-204ENST00000539827 RALGAPA2Q2PPJ7 1873 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 TARSL2A2RTX5 802 aaKnown RBP23.89■■□□□ 1.42
HOMER3-204ENST00000539827 PGRMC1O00264 195 aaKnown RBP23.89■■□□□ 1.42
HOMER3-204ENST00000539827 PPEF2O14830 753 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 ZRANB2O95218 330 aaKnown RBP eCLIP23.89■■□□□ 1.42
HOMER3-204ENST00000539827 MARCKSL1P49006 195 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 RAD23BP54727 409 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 NKX3-2P78367 333 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 SLC7A5Q01650 507 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 PTP4A2Q12974 167 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 ZNF211Q13398 564 aaPredicted RBP23.89■■□□□ 1.42
HOMER3-204ENST00000539827 WDR93Q6P2C0 686 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 REM2Q8IYK8 340 aaPredicted RBP23.89■■□□□ 1.42
HOMER3-204ENST00000539827 WHAMMQ8TF30 809 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 ALG3Q92685 438 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 ARFGAP3Q9NP61 516 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 PARP2Q9UGN5 583 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 SRRDQ9UH36 339 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 DERAQ9Y315 318 aa23.89■■□□□ 1.42
HOMER3-204ENST00000539827 CASP8AP2Q9UKL3 1982 aa23.89■■□□□ 1.41
HOMER3-204ENST00000539827 P4HA1P13674 534 aa23.89■■□□□ 1.41
HOMER3-204ENST00000539827 FAXDC2Q96IV6 333 aa23.89■■□□□ 1.41
HOMER3-204ENST00000539827 KRT12Q99456 494 aa23.89■■□□□ 1.41
HOMER3-204ENST00000539827 AP1M1Q9BXS5 423 aa23.89■■□□□ 1.41
HOMER3-204ENST00000539827 ELOVL4Q9GZR5 314 aa23.89■■□□□ 1.41
HOMER3-204ENST00000539827 CYP3A43Q9HB55 503 aa23.89■■□□□ 1.41
HOMER3-204ENST00000539827 CREBZFQ9NS37 354 aa23.89■■□□□ 1.41
HOMER3-204ENST00000539827 TRPV2Q9Y5S1 764 aa23.89■■□□□ 1.41
HOMER3-204ENST00000539827 M0QZ92 97 aa23.88■■□□□ 1.41
HOMER3-204ENST00000539827 SPOPO43791 374 aa23.88■■□□□ 1.41
HOMER3-204ENST00000539827 CTSHP09668 335 aa23.88■■□□□ 1.41
HOMER3-204ENST00000539827 TNNC1P63316 161 aa23.88■■□□□ 1.41
HOMER3-204ENST00000539827 DENND1BQ6P3S1 775 aa23.88■■□□□ 1.41
HOMER3-204ENST00000539827 ALKAL1Q6UXT8 129 aa23.88■■□□□ 1.41
HOMER3-204ENST00000539827 KLHDC9Q8NEP7 349 aa23.88■■□□□ 1.41
HOMER3-204ENST00000539827 DMGDHQ9UI17 866 aaKnown RBP23.88■■□□□ 1.41
HOMER3-204ENST00000539827 MIF4GDA9UHW6 222 aaKnown RBP23.87■■□□□ 1.41
HOMER3-204ENST00000539827 TUBBP07437 444 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 C1QBPQ07021 282 aaKnown RBP23.87■■□□□ 1.41
HOMER3-204ENST00000539827 ZBTB6Q15916 424 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 C8orf74Q6P047 294 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 KLHL7Q8IXQ5 586 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 UBL4BQ8N7F7 174 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 SLC4A11Q8NBS3 891 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 BEST2Q8NFU1 509 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 CNTN3Q9P232 1028 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 TMEM59LQ9UK28 342 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 PCDHGC3Q9UN70 934 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 CILPO75339 1184 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 ERLIN1O75477 346 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 GJB6O95452 261 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 LONRF2Q1L5Z9 754 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 AADACL2Q6P093 401 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 WDTC1Q8N5D0 677 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 TMEM35BQ8NCS4 154 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 CD101Q93033 1021 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 VCPIP1Q96JH7 1222 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 WNT8AQ9H1J5 351 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 PLEKHA4Q9H4M7 779 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 IPPQ9Y573 584 aa23.87■■□□□ 1.41
HOMER3-204ENST00000539827 LSM8O95777 96 aaKnown RBP23.86■■□□□ 1.41
HOMER3-204ENST00000539827 STAU1O95793 577 aaKnown RBP23.86■■□□□ 1.41
HOMER3-204ENST00000539827 PAEPP09466 180 aa23.86■■□□□ 1.41
HOMER3-204ENST00000539827 PPP1R2P3Q6NXS1 205 aa23.86■■□□□ 1.41
HOMER3-204ENST00000539827 RSPH3Q86UC2 560 aa23.86■■□□□ 1.41
HOMER3-204ENST00000539827 SMG8Q8ND04 991 aaKnown RBP23.86■■□□□ 1.41
HOMER3-204ENST00000539827 CARD9Q9H257 536 aa23.86■■□□□ 1.41
HOMER3-204ENST00000539827 FGGP02679 453 aa23.85■■□□□ 1.41
HOMER3-204ENST00000539827 MMP8P22894 467 aa23.85■■□□□ 1.41
HOMER3-204ENST00000539827 HOXD10P28358 340 aa23.85■■□□□ 1.41
HOMER3-204ENST00000539827 PEX5P50542 639 aa23.85■■□□□ 1.41
HOMER3-204ENST00000539827 MYO1EQ12965 1108 aa23.85■■□□□ 1.41
HOMER3-204ENST00000539827 BEND6Q5SZJ8 279 aaPredicted RBP23.85■■□□□ 1.41
HOMER3-204ENST00000539827 TWF2Q6IBS0 349 aaKnown RBP23.85■■□□□ 1.41
HOMER3-204ENST00000539827 CCSAPQ6IQ19 270 aaPredicted RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms