RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ANO5Q75V66 913 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 FAM83AQ86UY5 434 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 ERICH1Q86X53 443 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 ENDOVQ8N8Q3 282 aaKnown RBP14.02□□□□□ -0.17
UBE3B-209ENST00000539584 IL31RAQ8NI17 732 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 NKD2Q969F2 451 aaPredicted RBP14.02□□□□□ -0.17
UBE3B-209ENST00000539584 ERP27Q96DN0 273 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 TOPORSQ9NS56 1045 aaPredicted RBP14.02□□□□□ -0.17
UBE3B-209ENST00000539584 GINM1Q9NU53 330 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 DNAJC17Q9NVM6 304 aaKnown RBP14.02□□□□□ -0.17
UBE3B-209ENST00000539584 LNPEPQ9UIQ6 1025 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 CORO1CQ9ULV4 474 aaPredicted RBP14.02□□□□□ -0.17
UBE3B-209ENST00000539584 SCN9AQ15858 1988 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 H0YIN7 160 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 NFIBO00712 420 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 C2CD2LO14523 706 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 TYROBPO43914 113 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 CALB1P05937 261 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 ACO1P21399 889 aaKnown RBP14.01□□□□□ -0.17
UBE3B-209ENST00000539584 IBSPP21815 317 aaPredicted RBP14.01□□□□□ -0.17
UBE3B-209ENST00000539584 GCAP28676 217 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 TAS2R40P59535 323 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 SLFN12LQ6IEE8 588 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 CYP4F22Q6NT55 531 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 ANKLE1Q8NAG6 615 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 GPRASP2Q96D09 838 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 ZNF570Q96NI8 536 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 PCDH9Q9HC56 1237 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.01□□□□□ -0.17
UBE3B-209ENST00000539584 FBXO28Q9NVF7 368 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 CYP39A1Q9NYL5 469 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 ARHGAP28Q9P2N2 729 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 ZNF70Q9UC06 446 aaPredicted RBP14.01□□□□□ -0.17
UBE3B-209ENST00000539584 ZNF148Q9UQR1 794 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 CHKBQ9Y259 395 aa14.01□□□□□ -0.17
UBE3B-209ENST00000539584 COL11A2P13942 1736 aaPredicted RBP14.01□□□□□ -0.17
UBE3B-209ENST00000539584 TCP10L2B9ZVM9 353 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 TM9SF1O15321 606 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 LSM8O95777 96 aaKnown RBP14□□□□□ -0.17
UBE3B-209ENST00000539584 CALRP27797 417 aaKnown RBP14□□□□□ -0.17
UBE3B-209ENST00000539584 GNA15P30679 374 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 PSEN1P49768 467 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 DNAJC3Q13217 504 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 BLMHQ13867 455 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 LLGL1Q15334 1064 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 HHATQ5VTY9 493 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 FAM47EQ6ZV65 393 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 STK32AQ8WU08 396 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 PRCCQ92733 491 aaPredicted RBP14□□□□□ -0.17
UBE3B-209ENST00000539584 CEP170P1Q96L14 293 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 SLITRK1Q96PX8 696 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 PAIP2Q9BPZ3 127 aaKnown RBP14□□□□□ -0.17
UBE3B-209ENST00000539584 C11orf70Q9BRQ4 267 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 FAM213AQ9BRX8 229 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 ZNF518BQ9C0D4 1074 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 TLE6Q9H808 572 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 PDLIM7Q9NR12 457 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 HLA-DRAP01903 254 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 TROVE2P10155 538 aaKnown RBP eCLIP14□□□□□ -0.17
UBE3B-209ENST00000539584 CHRM1P11229 460 aaPredicted RBP14□□□□□ -0.17
UBE3B-209ENST00000539584 GNAZP19086 355 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 TNNI1P19237 187 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 CA4P22748 312 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 RXRBP28702 533 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 PTPN4P29074 926 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 DSG3P32926 999 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 PIK3CAP42336 1068 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 ARSEP51690 589 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 AP3M2P53677 418 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 VCPP55072 806 aaKnown RBP14□□□□□ -0.17
UBE3B-209ENST00000539584 GEMIN4P57678 1058 aaKnown RBP14□□□□□ -0.17
UBE3B-209ENST00000539584 PIGHQ14442 188 aaPredicted RBP14□□□□□ -0.17
UBE3B-209ENST00000539584 DLGAP5Q15398 846 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 SPDYE2Q495Y8 402 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 EFHC2Q5JST6 749 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 NLRX1Q86UT6 975 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 TTC13Q8NBP0 860 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 C10orf82Q8WW14 230 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 ZNF516Q92618 1163 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 UTP4Q969X6 686 aaKnown RBP14□□□□□ -0.17
UBE3B-209ENST00000539584 BICD1Q96G01 975 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 NAF1Q96HR8 494 aaKnown RBP14□□□□□ -0.17
UBE3B-209ENST00000539584 FAXDC2Q96IV6 333 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 PDCD2LQ9BRP1 358 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 SLC38A10Q9HBR0 1119 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 CYLDQ9NQC7 956 aa14□□□□□ -0.17
UBE3B-209ENST00000539584 ZNFX1Q9P2E3 1918 aaKnown RBP14□□□□□ -0.17
UBE3B-209ENST00000539584 TMEM191CA6NGB0 347 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 CCNE2O96020 404 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 PIGRP01833 764 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 TMEM191BP0C7N4 346 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 PECAM1P16284 738 aaPredicted RBP13.99□□□□□ -0.17
UBE3B-209ENST00000539584 MMP8P22894 467 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 LIG4P49917 911 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 KLHL38Q2WGJ6 581 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 TFDP3Q5H9I0 405 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 RNASEH2BQ5TBB1 312 aaKnown RBP13.99□□□□□ -0.17
UBE3B-209ENST00000539584 PLA2G4FQ68DD2 849 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 NIPA2Q8N8Q9 360 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 PWWP2AQ96N64 755 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms