RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 PGM5Q15124 567 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 TRMT1LQ7Z2T5 733 aaKnown RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 ALLCQ8N6M5 410 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 FEZF2Q8TBJ5 459 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 ERP27Q96DN0 273 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 RBM41Q96IZ5 413 aaKnown RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 SMC6Q96SB8 1091 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 SENP7Q9BQF6 1050 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 GLIS2Q9BZE0 524 aaPredicted RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 FHDC1Q9C0D6 1143 aaPredicted RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 SSU72Q9NP77 194 aaKnown RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 PDLIM7Q9NR12 457 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 IP6K2Q9UHH9 426 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 SLC24A2Q9UI40 661 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 DNPEPQ9ULA0 475 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 CNTN6Q9UQ52 1028 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 USTQ9Y2C2 406 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 LRRC42Q9Y546 428 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 ARID2Q68CP9 1835 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 CLRN2A0PK11 232 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 POC1B-GALNT4F8VUJ3 575 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 TRAFD1O14545 582 aaPredicted RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 HNRNPDLO14979 420 aaKnown RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 TLR3O15455 904 aaKnown RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 ECM2O94769 699 aaPredicted RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 TJP3O95049 919 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 STBD1O95210 358 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 CFHP08603 1231 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 MMP10P09238 476 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 T-ENOLP0DO92 83 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 PECAM1P16284 738 aaPredicted RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 KRT15P19012 456 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 EIF2AK2P19525 551 aaKnown RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 CALB2P22676 271 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 RPA3P35244 121 aaPredicted RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 RASSF2P50749 326 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 MCL1Q07820 350 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 LRRC38Q5VT99 294 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 GLIS1Q8NBF1 620 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 LRRC8CQ8TDW0 803 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 SH3TC2Q8TF17 1288 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 C10orf82Q8WW14 230 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 SLC7A6OSQ96CW6 309 aaPredicted RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 SLITRK1Q96PX8 696 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 RNPEPL1Q9HAU8 725 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 CYLDQ9NQC7 956 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 PARVAQ9NVD7 372 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 TCEAL9Q9UHQ7 104 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 HAO1Q9UJM8 370 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 GRID1Q9ULK0 1009 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 RPL26L1Q9UNX3 145 aaKnown RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 ZNF148Q9UQR1 794 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 PSME4Q14997 1843 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 YDJCA8MPS7 323 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 TYROBPO43914 113 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 LUC7L3O95232 432 aaKnown RBP10.21□□□□□ -0.77
CDH13-204ENST00000539548 CHRM1P11229 460 aaPredicted RBP10.21□□□□□ -0.77
CDH13-204ENST00000539548 MYCLP12524 364 aaPredicted RBP10.21□□□□□ -0.77
CDH13-204ENST00000539548 ABCD1P33897 745 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 PTPN7P35236 360 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 SSR1P43307 286 aaKnown RBP10.21□□□□□ -0.77
CDH13-204ENST00000539548 ARSEP51690 589 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 CUL2Q13617 745 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 BLMHQ13867 455 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 SLC1A5Q15758 541 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 ZC3H12AQ5D1E8 599 aaKnown RBP10.21□□□□□ -0.77
CDH13-204ENST00000539548 WASHC2DQ5SRD0 308 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 RNASEH2BQ5TBB1 312 aaKnown RBP10.21□□□□□ -0.77
CDH13-204ENST00000539548 TAS1R3Q7RTX0 852 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 FAM84AQ96KN4 292 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 CEP170P1Q96L14 293 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 KIAA1683Q9H0B3 1180 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 SLCO1B3Q9NPD5 702 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 NKX1-2Q9UD57 310 aaPredicted RBP10.21□□□□□ -0.77
CDH13-204ENST00000539548 FETUBQ9UGM5 382 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 PCDHB4Q9Y5E5 795 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 PCDHA10Q9Y5I2 948 aa10.21□□□□□ -0.77
CDH13-204ENST00000539548 TMEM191CA6NGB0 347 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 H0YCG3 227 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 H0YIN7 160 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 DKC1O60832 514 aaKnown RBP eCLIP10.21□□□□□ -0.78
CDH13-204ENST00000539548 ZBED4O75132 1171 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 PEX11AO75192 247 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 SMNDC1O75940 238 aaKnown RBP eCLIP10.21□□□□□ -0.78
CDH13-204ENST00000539548 VNN1O95497 513 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 TMEM191BP0C7N4 346 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 ZSCAN5DPP0CG00 497 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 KRT10P13645 584 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 TNNI1P19237 187 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 CA4P22748 312 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 GNA15P30679 374 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 GJC1P36383 396 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 PIK3CAP42336 1068 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 SOX10P56693 466 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 RPS6P62753 249 aaKnown RBP10.21□□□□□ -0.78
CDH13-204ENST00000539548 GPS1Q13098 491 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 ATP13A4Q4VNC1 1196 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 SLC45A4Q5BKX6 768 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms