RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 SH3GL3Q99963 347 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 DMAC2Q9NW81 257 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 GABBR1Q9UBS5 961 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 IGLV3-22A0A075B6J6 115 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 SPDYE5A6NIY4 337 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 HLA-DRAP01903 254 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 CYP1A2P05177 515 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 CIITAP33076 1130 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 NPTX2P47972 431 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 BPIFB4P59827 614 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 RPL7AP62424 266 aaKnown RBP16.77■□□□□ 0.28
MCF2L-232ENST00000535094 SCYL2Q6P3W7 929 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 CEP128Q6ZU80 1094 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 OTOAQ7RTW8 1153 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 PDIK1LQ8N165 341 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 PAPOLBQ9NRJ5 636 aaKnown RBP16.77■□□□□ 0.28
MCF2L-232ENST00000535094 PSMC3IPQ9P2W1 217 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-232ENST00000535094 FAM198AQ9UFP1 575 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 TBX20Q9UMR3 447 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 SERPINB4P48594 390 aa16.77■□□□□ 0.27
MCF2L-232ENST00000535094 EPHB1P54762 984 aa16.77■□□□□ 0.27
MCF2L-232ENST00000535094 RNF220Q5VTB9 566 aa16.77■□□□□ 0.27
MCF2L-232ENST00000535094 MXRA8Q9BRK3 442 aa16.77■□□□□ 0.27
MCF2L-232ENST00000535094 PCDHB2Q9Y5E7 798 aa16.77■□□□□ 0.27
MCF2L-232ENST00000535094 B2RBV5 119 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 H7C0C1 242 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 GYS1P13807 737 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 ATP5OP48047 213 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 JAG1P78504 1218 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 RNF43Q68DV7 783 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 CASC4Q6P4E1 433 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 TMEM109Q9BVC6 243 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 CFHP08603 1231 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 ITGB5P18084 799 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 HSPA1LP34931 641 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 CC2D2BQ6DHV5 1058 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 TRABD2AQ86V40 505 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 LMO3Q8TAP4 145 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 TRIM11Q96F44 468 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 PRMT6Q96LA8 375 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-232ENST00000535094 THTPAQ9BU02 230 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 SMG5Q9UPR3 1016 aaKnown RBP16.76■□□□□ 0.27
MCF2L-232ENST00000535094 IVNS1ABPQ9Y6Y0 642 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 F8VP50 259 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 PROSCO94903 275 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 GCLCP48506 637 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-232ENST00000535094 ARL4CP56559 192 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 TRPC3Q13507 836 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 KHDC1Q4VXA5 237 aaKnown RBP16.76■□□□□ 0.27
MCF2L-232ENST00000535094 SWSAP1Q6NVH7 229 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 HHIPL2Q6UWX4 724 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 RFWD2Q8NHY2 731 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 RMDN3Q96TC7 470 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 MANSC1Q9H8J5 431 aa16.76■□□□□ 0.27
MCF2L-232ENST00000535094 CCDC22O60826 627 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 ATP9AO75110 1047 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 ALDH18A1P54886 795 aaKnown RBP16.75■□□□□ 0.27
MCF2L-232ENST00000535094 NR1H3Q13133 447 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 PPP2R5CQ13362 524 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 CCNG2Q16589 344 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 CDO1Q16878 200 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 FAXCQ5TGI0 409 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 DSTYKQ6XUX3 929 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 SYDE1Q6ZW31 735 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-232ENST00000535094 SP8Q8IXZ3 490 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 DEPTORQ8TB45 409 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 UCMAQ8WVF2 138 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 FAM81BQ96LP2 452 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 ZNF341Q9BYN7 854 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 CCDC134Q9H6E4 229 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 CYP4F11Q9HBI6 524 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 PIK3CDO00329 1044 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 STAM2O75886 525 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 BGNP21810 368 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 PSMA2P25787 234 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 MTMR2Q13614 643 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 MAB21L3Q8N8X9 362 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 TMEM143Q96AN5 459 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 TTC25Q96NG3 672 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 G3BP2Q9UN86 482 aaKnown RBP16.75■□□□□ 0.27
MCF2L-232ENST00000535094 ITGB4P16144 1822 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 SLC26A4O43511 780 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 TCF4P15884 667 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 SLC1A1P43005 524 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 ORC1Q13415 861 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 BLMHQ13867 455 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 SIAH1Q8IUQ4 282 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 ARHGAP24Q8N264 748 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 RBBP8NLQ8NC74 664 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-232ENST00000535094 CCDC110Q8TBZ0 833 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 SCG3Q8WXD2 468 aaKnown RBP16.75■□□□□ 0.27
MCF2L-232ENST00000535094 SLC17A7Q9P2U7 560 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 NENFQ9UMX5 172 aa16.75■□□□□ 0.27
MCF2L-232ENST00000535094 ECE2O60344 883 aa16.74■□□□□ 0.27
MCF2L-232ENST00000535094 CST8O60676 142 aa16.74■□□□□ 0.27
MCF2L-232ENST00000535094 TOM1L1O75674 476 aa16.74■□□□□ 0.27
MCF2L-232ENST00000535094 SMNDC1O75940 238 aaKnown RBP eCLIP16.74■□□□□ 0.27
MCF2L-232ENST00000535094 PTPN4P29074 926 aa16.74■□□□□ 0.27
MCF2L-232ENST00000535094 MRPS35P82673 323 aaKnown RBP16.74■□□□□ 0.27
MCF2L-232ENST00000535094 TFAMQ00059 246 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms