RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 MT-ND3P03897 115 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 HIF1AQ16665 826 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 CRY2Q49AN0 593 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 AP1ARQ63HQ0 302 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 SWSAP1Q6NVH7 229 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 DNAJC24Q6P3W2 148 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 RFWD3Q6PCD5 774 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 ZBTB33Q86T24 672 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 AGGF1Q8N302 714 aaeCLIP7.22□□□□□ -1.25
RAG1-203ENST00000534663 OGFOD1Q8N543 542 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 GRAMD1AQ96CP6 724 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 ZDHHC15Q96MV8 337 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 FAM161BQ96MY7 647 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 RMDN3Q96TC7 470 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 SLC13A1Q9BZW2 595 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 ZCWPW1Q9H0M4 648 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 CCDC134Q9H6E4 229 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 MRPL47Q9HD33 250 aaKnown RBP7.22□□□□□ -1.25
RAG1-203ENST00000534663 IVNS1ABPQ9Y6Y0 642 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 DPPA5A6NC42 116 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 CAPN9O14815 690 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 PROSCO94903 275 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 TJP3O95049 919 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 KRT19P08727 400 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 MMP10P09238 476 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 UBTFL6P0CB48 400 aaPredicted RBP7.22□□□□□ -1.25
RAG1-203ENST00000534663 RFC5P40937 340 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 ARFIP2P53365 341 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 ORC1Q13415 861 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 CYP1B1Q16678 543 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 OTOAQ7RTW8 1153 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 TRABD2AQ86V40 505 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 TCP10LQ8TDR4 215 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 STK32AQ8WU08 396 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 LRRN4Q8WUT4 740 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 VTI1AQ96AJ9 217 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 TMEM143Q96AN5 459 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 FAM111AQ96PZ2 611 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 TAAR1Q96RJ0 339 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 MAK16Q9BXY0 300 aaKnown RBP7.22□□□□□ -1.25
RAG1-203ENST00000534663 TRIM55Q9BYV6 548 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 TMEM39BQ9GZU3 492 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 DENND2DQ9H6A0 471 aaPredicted RBP7.22□□□□□ -1.25
RAG1-203ENST00000534663 NXF1Q9UBU9 619 aaKnown RBP7.22□□□□□ -1.25
RAG1-203ENST00000534663 PCDHB2Q9Y5E7 798 aa7.22□□□□□ -1.25
RAG1-203ENST00000534663 UBE4BO95155 1302 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 PCNTO95613 3336 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 PPP1R12AO14974 1030 aaPredicted RBP7.21□□□□□ -1.25
RAG1-203ENST00000534663 P4HA2O15460 535 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 AP1G2O75843 785 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 ZCCHC18P0CG32 403 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 MARK3P27448 753 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 SERPINB3P29508 390 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 ALDH1B1P30837 517 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 DSG3P32926 999 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 GCLCP48506 637 aaPredicted RBP7.21□□□□□ -1.25
RAG1-203ENST00000534663 KLC1Q07866 573 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 ZRSR2Q15696 482 aaKnown RBP7.21□□□□□ -1.25
RAG1-203ENST00000534663 CCNG2Q16589 344 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 TKFCQ3LXA3 575 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 GALNTL6Q49A17 601 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 ISLR2Q6UXK2 745 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 PODNQ7Z5L7 613 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 SLC9A9Q8IVB4 645 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 GPD1LQ8N335 351 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 GMCL1P1Q8NEA9 526 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 RFWD2Q8NHY2 731 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 HSPH1Q92598 858 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 ZNF75CPQ92670 426 aaPredicted RBP7.21□□□□□ -1.25
RAG1-203ENST00000534663 UTP4Q969X6 686 aaKnown RBP7.21□□□□□ -1.25
RAG1-203ENST00000534663 CFAP36Q96G28 342 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 ZBTB45Q96K62 511 aaPredicted RBP7.21□□□□□ -1.25
RAG1-203ENST00000534663 DDX50Q9BQ39 737 aaKnown RBP7.21□□□□□ -1.25
RAG1-203ENST00000534663 KCND2Q9NZV8 630 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 COL20A1Q9P218 1284 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 SLC17A7Q9P2U7 560 aa7.21□□□□□ -1.25
RAG1-203ENST00000534663 PPARGC1AQ9UBK2 798 aaKnown RBP7.21□□□□□ -1.25
RAG1-203ENST00000534663 ARHGAP42A6NI28 874 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 SPDYE5A6NIY4 337 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 PIK3CDO00329 1044 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 NVLO15381 856 aaKnown RBP7.21□□□□□ -1.26
RAG1-203ENST00000534663 KRT36O76013 467 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 ENO1P06733 434 aaKnown RBP7.21□□□□□ -1.26
RAG1-203ENST00000534663 INHBAP08476 426 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 VIL1P09327 827 aaKnown RBP7.21□□□□□ -1.26
RAG1-203ENST00000534663 GNAT1P11488 350 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 IVDP26440 423 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 ABL2P42684 1182 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 KPNB1Q14974 876 aaKnown RBP7.21□□□□□ -1.26
RAG1-203ENST00000534663 DLGAP5Q15398 846 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 KHDC1Q4VXA5 237 aaKnown RBP7.21□□□□□ -1.26
RAG1-203ENST00000534663 RNF43Q68DV7 783 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 DSTYKQ6XUX3 929 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 SLC25A41Q8N5S1 370 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 RBBP8NLQ8NC74 664 aaPredicted RBP7.21□□□□□ -1.26
RAG1-203ENST00000534663 DDX27Q96GQ7 796 aaKnown RBP7.21□□□□□ -1.26
RAG1-203ENST00000534663 SHCBP1LQ9BZQ2 653 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 CYP39A1Q9NYL5 469 aa7.21□□□□□ -1.26
RAG1-203ENST00000534663 CPSF2Q9P2I0 782 aaKnown RBP7.21□□□□□ -1.26
RAG1-203ENST00000534663 H3BRJ5 948 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms