RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, human

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP3-215	ENST00000533946	OAZ2	O95190	189 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	HSP90AA1	P07900	732 aa	Known RBP	10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	GLUL	P15104	373 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	GAP43	P17677	238 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	CYP3A5	P20815	502 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	ACAT1	P24752	427 aa	Known RBP	10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	POLR2B	P30876	1174 aa	Known RBP	10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	TFAM	Q00059	246 aa	Known RBP	10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	PABPC1L	Q4VXU2	614 aa	Known RBP	10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	SDHAF4	Q5VUM1	108 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	ALYREF	Q86V81	257 aa	Known RBP	10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	TCEAL8	Q8IYN2	117 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	FLCN	Q8NFG4	579 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	BEST2	Q8NFU1	509 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	ZNF516	Q92618	1163 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	ACSF2	Q96CM8	615 aa	Predicted RBP	10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	FAM122A	Q96E09	287 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	PAGE5	Q96GU1	130 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	C7orf25	Q9BPX7	421 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	FOXQ1	Q9C009	403 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	OLFML3	Q9NRN5	406 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	CDH7	Q9ULB5	785 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	DUSP12	Q9UNI6	340 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	HCN4	Q9Y3Q4	1203 aa		10.43	□□□□□ -0.74
SSBP3-215	ENST00000533946	CACNA1I	Q9P0X4	2223 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	MTMR11	A4FU01	709 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946		H0YCG3	227 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	CYB561D2	O14569	222 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	ATP2C2	O75185	946 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	CST3	P01034	146 aa	Predicted RBP	10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	ITGB3	P05106	788 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	HNRNPA1	P09651	372 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	MYL4	P12829	197 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	CPB1	P15086	417 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	PFKFB1	P16118	471 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	TXLNA	P40222	546 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	VIPR2	P41587	438 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	NDUFA8	P51970	172 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	YWHAH	Q04917	246 aa	Predicted RBP	10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	STK4	Q13043	487 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	GRM2	Q14416	872 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	FAM78A	Q5JUQ0	283 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	OVOS1	Q6IE37	1185 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	CENPP	Q6IPU0	288 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	ZNF280D	Q6N043	979 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	TMC8	Q8IU68	726 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	BRSK2	Q8IWQ3	736 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	SYCP3	Q8IZU3	236 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	PLCD3	Q8N3E9	789 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	KIAA0895	Q8NCT3	520 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	SHKBP1	Q8TBC3	707 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	ZNF507	Q8TCN5	953 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	PYM1	Q9BRP8	204 aa	Known RBP	10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	MKNK1	Q9BUB5	465 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	MTMR12	Q9C0I1	747 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	TNMD	Q9H2S6	317 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	RBAK	Q9NYW8	714 aa	Predicted RBP	10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	KCNH3	Q9ULD8	1083 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	L1RE1	Q9UN81	338 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	AGAP1	Q9UPQ3	857 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	MRPS23	Q9Y3D9	190 aa	Known RBP	10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	YIPF1	Q9Y548	306 aa		10.42	□□□□□ -0.74
SSBP3-215	ENST00000533946	COL4A2	P08572	1712 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	DCHS1	Q96JQ0	3298 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	EXTL3	O43909	919 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	C1R	P00736	705 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	DCN	P07585	359 aa	Known RBP	10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	ATF6	P18850	670 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	LMO2	P25791	158 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	HOXA9	P31269	272 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	CYP2J2	P51589	502 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	CREM	Q03060	361 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	SNW1	Q13573	536 aa	Known RBP	10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	TEAD2	Q15562	447 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	UVSSA	Q2YD98	709 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	SLC39A12	Q504Y0	691 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	WDR44	Q5JSH3	913 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	FAM26F	Q5R3K3	315 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	CCDC65	Q8IXS2	484 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	UBALD2	Q8IYN6	164 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	PDCL2	Q8N4E4	241 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	RIN3	Q8TB24	985 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	GIPC2	Q8TF65	315 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	ERCC4	Q92889	916 aa	Predicted RBP	10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	HVCN1	Q96D96	273 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	MFSD14A	Q96MC6	490 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	SMG9	Q9H0W8	520 aa	Known RBP	10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	ASB7	Q9H672	318 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	AGPAT3	Q9NRZ7	376 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	HSPBP1	Q9NZL4	362 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	SEL1L	Q9UBV2	794 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	AFF4	Q9UHB7	1163 aa	Known RBP	10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	HPSE	Q9Y251	543 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	PCDHB13	Q9Y5F0	798 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946	TICRR	Q7Z2Z1	1910 aa		10.41	□□□□□ -0.74
SSBP3-215	ENST00000533946		A0A1W2PRU2	124 aa		10.4	□□□□□ -0.74
SSBP3-215	ENST00000533946		H7C4K7	107 aa		10.4	□□□□□ -0.74
SSBP3-215	ENST00000533946	LRG1	P02750	347 aa		10.4	□□□□□ -0.74

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