RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 NOP14P78316 857 aaKnown RBP20.45■□□□□ 0.86
CAPN1-226ENST00000533820 GPS1Q13098 491 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 ZNF268Q14587 947 aaPredicted RBP20.45■□□□□ 0.86
CAPN1-226ENST00000533820 RHOT1Q8IXI2 618 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 ERP27Q96DN0 273 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 TRPC5Q9UL62 973 aaPredicted RBP20.45■□□□□ 0.86
CAPN1-226ENST00000533820 TARSP26639 723 aaKnown RBP20.45■□□□□ 0.86
CAPN1-226ENST00000533820 DYNLT1P63172 113 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 TDRD10Q5VZ19 366 aaKnown RBP20.45■□□□□ 0.86
CAPN1-226ENST00000533820 NLRX1Q86UT6 975 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 MAGEC3Q8TD91 643 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 TMEM143Q96AN5 459 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 LBHD1Q9BQE6 289 aaPredicted RBP20.45■□□□□ 0.86
CAPN1-226ENST00000533820 PDCD2LQ9BRP1 358 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 C12orf65Q9H3J6 166 aaKnown RBP20.45■□□□□ 0.86
CAPN1-226ENST00000533820 ST6GALNAC4Q9H4F1 302 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 RXFP1Q9HBX9 757 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 ZNF232Q9UNY5 417 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 NEU2Q9Y3R4 380 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 MAPK13O15264 365 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 GNA15P30679 374 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 ARSEP51690 589 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 STRN3Q13033 797 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 MTA1Q13330 715 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 KLF1Q13351 362 aaPredicted RBP20.45■□□□□ 0.86
CAPN1-226ENST00000533820 MAMLD1Q13495 774 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 TXNRD3NBQ6F5E7 133 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 DNAJC14Q6Y2X3 702 aaPredicted RBP20.45■□□□□ 0.86
CAPN1-226ENST00000533820 MCF2L2Q86YR7 1114 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 TMC2Q8TDI7 906 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 C7orf43Q8WVR3 580 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 RIPK3Q9Y572 518 aa20.45■□□□□ 0.86
CAPN1-226ENST00000533820 LGR5O75473 907 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 APBA3O96018 575 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 BAATQ14032 418 aaPredicted RBP20.44■□□□□ 0.86
CAPN1-226ENST00000533820 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.44■□□□□ 0.86
CAPN1-226ENST00000533820 MAIP1Q8WWC4 291 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 MAGEB18Q96M61 343 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 FAM47DPA6NHR8 397 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 GCNT1Q02742 428 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 LIN9Q5TKA1 542 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 MFSD7Q6UXD7 560 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 MON1BQ7L1V2 547 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 TAS1R3Q7RTX0 852 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 USP37Q86T82 979 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 ZBED8Q8IZ13 594 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 LARGE2Q8N3Y3 721 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 MYLK2Q9H1R3 596 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 APOBEC3GQ9HC16 384 aaKnown RBP20.44■□□□□ 0.86
CAPN1-226ENST00000533820 BATF3Q9NR55 127 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 HAO1Q9UJM8 370 aa20.44■□□□□ 0.86
CAPN1-226ENST00000533820 IL9RQ01113 521 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 GAD2Q05329 585 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 CCNG2Q16589 344 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 RSBN1LQ6PCB5 846 aaPredicted RBP20.43■□□□□ 0.86
CAPN1-226ENST00000533820 EPAS1Q99814 870 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 POLR3FQ9H1D9 316 aaPredicted RBP20.43■□□□□ 0.86
CAPN1-226ENST00000533820 PCNTO95613 3336 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 A0A1W2PPM1 405 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 SMNDC1O75940 238 aaKnown RBP eCLIP20.43■□□□□ 0.86
CAPN1-226ENST00000533820 LYPLA2O95372 231 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 KRT1P04264 644 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 ASNSP08243 561 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 CA4P22748 312 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 MAN1A1P33908 653 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 RPA3P35244 121 aaPredicted RBP20.43■□□□□ 0.86
CAPN1-226ENST00000533820 SLC1A1P43005 524 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 IFT74Q96LB3 600 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 KLF6Q99612 283 aaPredicted RBP20.43■□□□□ 0.86
CAPN1-226ENST00000533820 TRABDQ9H4I3 376 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 ALG13Q9NP73 1137 aaKnown RBP20.43■□□□□ 0.86
CAPN1-226ENST00000533820 C15orf41Q9Y2V0 281 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 PCDHA10Q9Y5I2 948 aa20.43■□□□□ 0.86
CAPN1-226ENST00000533820 F8VP50 259 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 GOLGA8RI6L899 631 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 GNAT1P11488 350 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 NFX1Q12986 1120 aaKnown RBP20.42■□□□□ 0.86
CAPN1-226ENST00000533820 MTFR1Q15390 333 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 SYCP2LQ5T4T6 812 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 ANKRD35Q8N283 1001 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 TMEM121Q9BTD3 319 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 XPNPEP1Q9NQW7 623 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 PRKAG3Q9UGI9 489 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 IVNS1ABPQ9Y6Y0 642 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 PMM2O15305 246 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 SPIRE2Q8WWL2 714 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 MOV10L1Q9BXT6 1211 aaKnown RBP20.42■□□□□ 0.86
CAPN1-226ENST00000533820 KIAA1586Q9HCI6 787 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 AVENQ9NQS1 362 aaPredicted RBP20.42■□□□□ 0.86
CAPN1-226ENST00000533820 PXMP2Q9NR77 195 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 GRID1Q9ULK0 1009 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 PHTF1Q9UMS5 762 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 ONECUT3O60422 494 aaPredicted RBP20.42■□□□□ 0.86
CAPN1-226ENST00000533820 JAK3P52333 1124 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 CENPCQ03188 943 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 STAT4Q14765 748 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 SYDE1Q6ZW31 735 aaPredicted RBP20.42■□□□□ 0.86
CAPN1-226ENST00000533820 FBXL18Q96ME1 805 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 SYNPO2Q9UMS6 1093 aa20.42■□□□□ 0.86
CAPN1-226ENST00000533820 LRRIQ4A6NIV6 560 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms