RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 MICAL3Q7RTP6 2002 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 SSU72P8A0A1W2PR75 194 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 NOL4O94818 638 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 C4BPAP04003 597 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 TUBB4AP04350 444 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 YWHAEP62258 255 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 KLHL30Q0D2K2 578 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 NCOA4Q13772 614 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 ZBTB41Q5SVQ8 909 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 C1orf220Q5T0J3 134 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.74□□□□□ -0.537e-9■■■■■ 34.2
CCDC90B-218ENST00000533761 MRPL10Q7Z7H8 261 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 NPAS4Q8IUM7 802 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 NPAS3Q8IXF0 933 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 RNF169Q8NCN4 708 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 SMG8Q8ND04 991 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 PLEKHO2Q8TD55 490 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 TAS1R2Q8TE23 839 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 TOP1MTQ969P6 601 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 RNPC3Q96LT9 517 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 SLC9A7Q96T83 725 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 POP1Q99575 1024 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 DNAI2Q9GZS0 605 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 FAM124BQ9H5Z6 455 aaPredicted RBP11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 UBE2TQ9NPD8 197 aaPredicted RBP11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 KCND1Q9NSA2 647 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 ITGA11Q9UKX5 1188 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 FHOD1Q9Y613 1164 aa11.74□□□□□ -0.53
CCDC90B-218ENST00000533761 TTC3P53804 2025 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 F8VZ95 297 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 RBAK-RBAKDNI3L0D1 243 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 KIF2AO00139 706 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 EPHB6O15197 1021 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 HOXA2O43364 376 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 AKR1B10O60218 316 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 ZNF500O60304 480 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 GFPT2O94808 682 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 HLA-DRAP01903 254 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 ITGA4P13612 1032 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 ATF7P17544 494 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 IBSPP21815 317 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 ATICP31939 592 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 SOX5P35711 763 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 BPIFB4P59827 614 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 SHHQ15465 462 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 SEZ6Q53EL9 994 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 RASIP1Q5U651 963 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 TDRD10Q5VZ19 366 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 IQCEQ6IPM2 695 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 TRAPPC11Q7Z392 1133 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 TTC39CQ8N584 583 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 RSPH1Q8WYR4 309 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 MTMR12Q9C0I1 747 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 NXF3Q9H4D5 531 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 NHEJ1Q9H9Q4 299 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 CXXC1Q9P0U4 656 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 HES2Q9Y543 173 aa11.73□□□□□ -0.53
CCDC90B-218ENST00000533761 UPP2O95045 317 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 NDUFA10O95299 355 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 ATP2A2P16615 1042 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 JAM2P57087 298 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 DEFB103AP81534 67 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 GOLGA8FQ08AF8 430 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 GOLGA8DPQ0D2H9 430 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 MYO1EQ12965 1108 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 DRAP1Q14919 205 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 C9orf50Q5SZB4 431 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 GLB1LQ6UWU2 654 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 TMEM139Q8IV31 216 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 ABI1Q8IZP0 508 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 CEP120Q8N960 986 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 BEST2Q8NFU1 509 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 LMO3Q8TAP4 145 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 SIX2Q9NPC8 291 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 SLC38A7Q9NVC3 462 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 SNTG2Q9NY99 539 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 PARP2Q9UGN5 583 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 PYCARDQ9ULZ3 195 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 GIT1Q9Y2X7 761 aa11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 EPN1Q9Y6I3 576 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-218ENST00000533761 SOWAHDA6NJG2 315 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 LACTBL1A8MY62 500 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 GJB5O95377 273 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 AKAP5P24588 427 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 PRKCIP41743 596 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 NOP14P78316 857 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 RBP5P82980 135 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 PDE4CQ08493 712 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 ZNF699Q32M78 642 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 SLC10A6Q3KNW5 377 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 C10orf76Q5T2E6 689 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 PHLDB3Q6NSJ2 640 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 TDHQ8IZJ6 230 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 CCAR2Q8N163 923 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 SNX27Q96L92 541 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 RPS6KC1Q96S38 1066 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 APOL6Q9BWW8 343 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 TSGA10Q9BZW7 698 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 RSAD1Q9HA92 442 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 CNTN3Q9P232 1028 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms