RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 FSTL4Q6MZW2 842 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 CPLX2Q6PUV4 134 aaKnown RBP8.54□□□□□ -1.04
NXF1-215ENST00000533440 APBB1IPQ7Z5R6 666 aaPredicted RBP8.54□□□□□ -1.04
NXF1-215ENST00000533440 CATSPER3Q86XQ3 398 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 GPIHBP1Q8IV16 184 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 APPL2Q8NEU8 664 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 DEPTORQ8TB45 409 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 BPIFB1Q8TDL5 484 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 ZCCHC14Q8WYQ9 949 aaKnown RBP8.54□□□□□ -1.04
NXF1-215ENST00000533440 FAM212AQ96EL1 285 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 CHFRQ96EP1 664 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 MTMR9Q96QG7 549 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 CCDC94Q9BW85 323 aaPredicted RBP8.54□□□□□ -1.04
NXF1-215ENST00000533440 CDT1Q9H211 546 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 CRISPLD1Q9H336 500 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 PTPRHQ9HD43 1115 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 TOPORSQ9NS56 1045 aaPredicted RBP8.54□□□□□ -1.04
NXF1-215ENST00000533440 GJB4Q9NTQ9 266 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 CNTN3Q9P232 1028 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 PCDHB8Q9UN66 801 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 TNFSF13BQ9Y275 285 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 NUB1Q9Y5A7 615 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 KIF26AQ9ULI4 1882 aaPredicted RBP8.53□□□□□ -1.04
NXF1-215ENST00000533440 SETXQ7Z333 2677 aaKnown RBP8.53□□□□□ -1.04
NXF1-215ENST00000533440 M0QZQ0 153 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 MEFVO15553 781 aaPredicted RBP8.53□□□□□ -1.04
NXF1-215ENST00000533440 RNF40O75150 1001 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 CDC45O75419 566 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 MED24O75448 989 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 OAZ2O95190 189 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 XBP1P17861 261 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 MCM4P33991 863 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 TXKP42681 527 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 MCM2P49736 904 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 EPHB3P54753 998 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 CREB5Q02930 508 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 GRSF1Q12849 480 aaKnown RBP eCLIP8.53□□□□□ -1.04
NXF1-215ENST00000533440 DUSP4Q13115 394 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 KARSQ15046 597 aaKnown RBP8.53□□□□□ -1.04
NXF1-215ENST00000533440 PPP2R5AQ15172 486 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 PTPAQ15257 358 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 GPR158Q5T848 1215 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 PADI6Q6TGC4 694 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 RUFY3Q7L099 469 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 TNFRSF25Q93038 417 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 PSMG2Q969U7 264 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 COL26A1Q96A83 441 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 C18orf25Q96B23 403 aaPredicted RBP8.53□□□□□ -1.04
NXF1-215ENST00000533440 TBC1D32Q96NH3 1257 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 NACC1Q96RE7 527 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 ACO2Q99798 780 aaKnown RBP8.53□□□□□ -1.04
NXF1-215ENST00000533440 FAM83CQ9BQN1 747 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 KIFC3Q9BVG8 833 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 OXCT2Q9BYC2 517 aaPredicted RBP8.53□□□□□ -1.04
NXF1-215ENST00000533440 ATXN3LQ9H3M9 355 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 ZSWIM6Q9HCJ5 1215 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 TUFT1Q9NNX1 390 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 TMEM9BQ9NQ34 198 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 POLR3BQ9NW08 1133 aaPredicted RBP8.53□□□□□ -1.04
NXF1-215ENST00000533440 EBF1Q9UH73 591 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 CIZ1Q9ULV3 898 aaPredicted RBP8.53□□□□□ -1.04
NXF1-215ENST00000533440 MSRB2Q9Y3D2 182 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 NEUROG3Q9Y4Z2 214 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 ASB3Q9Y575 518 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 STK36Q9NRP7 1315 aa8.53□□□□□ -1.04
NXF1-215ENST00000533440 CELSR3Q9NYQ7 3312 aa8.52□□□□□ -1.04
NXF1-215ENST00000533440 ATG2BQ96BY7 2078 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 GCN1Q92616 2671 aaKnown RBP8.52□□□□□ -1.05
NXF1-215ENST00000533440 OTOL1A6NHN0 477 aaPredicted RBP8.52□□□□□ -1.05
NXF1-215ENST00000533440 K7ERI5 159 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 WNT7AO00755 349 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 ABLIM1O14639 778 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 KHNYNO15037 678 aaKnown RBP8.52□□□□□ -1.05
NXF1-215ENST00000533440 DCLK1O15075 740 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 FGF19O95750 216 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 EGFP01133 1207 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 CAPNS1P04632 268 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 PROZP22891 400 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 GABRR2P28476 465 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 ALDH1A3P47895 512 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 OSTNP61366 133 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 YWHAHQ04917 246 aaPredicted RBP8.52□□□□□ -1.05
NXF1-215ENST00000533440 STK3Q13188 491 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 NR5A1Q13285 461 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 GPR17Q13304 367 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 RUNX3Q13761 415 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 ARHGAP15Q53QZ3 475 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 PMS2CLQ68D20 193 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 CENPPQ6IPU0 288 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 SYT13Q7L8C5 426 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 DNAJB7Q7Z6W7 309 aaPredicted RBP8.52□□□□□ -1.05
NXF1-215ENST00000533440 ACAP3Q96P50 834 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 PGLYRP2Q96PD5 576 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 HHIPQ96QV1 700 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 POLR3CQ9BUI4 534 aaPredicted RBP8.52□□□□□ -1.05
NXF1-215ENST00000533440 TASP1Q9H6P5 420 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 FBRSL1Q9HCM7 1045 aaKnown RBP8.52□□□□□ -1.05
NXF1-215ENST00000533440 HPS4Q9NQG7 708 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 GKN1Q9NS71 199 aa8.52□□□□□ -1.05
NXF1-215ENST00000533440 THG1LQ9NWX6 298 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms