RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 MTMR9Q96QG7 549 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 CCDC94Q9BW85 323 aaPredicted RBP8.54□□□□□ -1.04
NXF1-212ENST00000531872 CDT1Q9H211 546 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 CRISPLD1Q9H336 500 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 PTPRHQ9HD43 1115 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 TOPORSQ9NS56 1045 aaPredicted RBP8.54□□□□□ -1.04
NXF1-212ENST00000531872 GJB4Q9NTQ9 266 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 CNTN3Q9P232 1028 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 PCDHB8Q9UN66 801 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 TNFSF13BQ9Y275 285 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 NUB1Q9Y5A7 615 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 KIF26AQ9ULI4 1882 aaPredicted RBP8.53□□□□□ -1.04
NXF1-212ENST00000531872 SETXQ7Z333 2677 aaKnown RBP8.53□□□□□ -1.04
NXF1-212ENST00000531872 M0QZQ0 153 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 MEFVO15553 781 aaPredicted RBP8.53□□□□□ -1.04
NXF1-212ENST00000531872 RNF40O75150 1001 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 CDC45O75419 566 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 MED24O75448 989 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 OAZ2O95190 189 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 XBP1P17861 261 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 MCM4P33991 863 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 TXKP42681 527 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 MCM2P49736 904 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 EPHB3P54753 998 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 CREB5Q02930 508 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 GRSF1Q12849 480 aaKnown RBP eCLIP8.53□□□□□ -1.04
NXF1-212ENST00000531872 DUSP4Q13115 394 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 KARSQ15046 597 aaKnown RBP8.53□□□□□ -1.04
NXF1-212ENST00000531872 PPP2R5AQ15172 486 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 PTPAQ15257 358 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 GPR158Q5T848 1215 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 PADI6Q6TGC4 694 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 RUFY3Q7L099 469 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 TNFRSF25Q93038 417 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 PSMG2Q969U7 264 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 COL26A1Q96A83 441 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 C18orf25Q96B23 403 aaPredicted RBP8.53□□□□□ -1.04
NXF1-212ENST00000531872 TBC1D32Q96NH3 1257 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 NACC1Q96RE7 527 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 ACO2Q99798 780 aaKnown RBP8.53□□□□□ -1.04
NXF1-212ENST00000531872 FAM83CQ9BQN1 747 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 KIFC3Q9BVG8 833 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 OXCT2Q9BYC2 517 aaPredicted RBP8.53□□□□□ -1.04
NXF1-212ENST00000531872 ATXN3LQ9H3M9 355 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 ZSWIM6Q9HCJ5 1215 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 TUFT1Q9NNX1 390 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 TMEM9BQ9NQ34 198 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 POLR3BQ9NW08 1133 aaPredicted RBP8.53□□□□□ -1.04
NXF1-212ENST00000531872 EBF1Q9UH73 591 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 MSRB2Q9Y3D2 182 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 NEUROG3Q9Y4Z2 214 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 ASB3Q9Y575 518 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 STK36Q9NRP7 1315 aa8.53□□□□□ -1.04
NXF1-212ENST00000531872 CELSR3Q9NYQ7 3312 aa8.52□□□□□ -1.04
NXF1-212ENST00000531872 ATG2BQ96BY7 2078 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 GCN1Q92616 2671 aaKnown RBP8.52□□□□□ -1.05
NXF1-212ENST00000531872 OTOL1A6NHN0 477 aaPredicted RBP8.52□□□□□ -1.05
NXF1-212ENST00000531872 K7ERI5 159 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 WNT7AO00755 349 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 ABLIM1O14639 778 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 KHNYNO15037 678 aaKnown RBP8.52□□□□□ -1.05
NXF1-212ENST00000531872 DCLK1O15075 740 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 FGF19O95750 216 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 EGFP01133 1207 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 CAPNS1P04632 268 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 PROZP22891 400 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 GABRR2P28476 465 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 ALDH1A3P47895 512 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 OSTNP61366 133 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 YWHAHQ04917 246 aaPredicted RBP8.52□□□□□ -1.05
NXF1-212ENST00000531872 STK3Q13188 491 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 NR5A1Q13285 461 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 GPR17Q13304 367 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 RUNX3Q13761 415 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 ARHGAP15Q53QZ3 475 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 PMS2CLQ68D20 193 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 CENPPQ6IPU0 288 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 SYT13Q7L8C5 426 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 DNAJB7Q7Z6W7 309 aaPredicted RBP8.52□□□□□ -1.05
NXF1-212ENST00000531872 ACAP3Q96P50 834 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 PGLYRP2Q96PD5 576 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 HHIPQ96QV1 700 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 POLR3CQ9BUI4 534 aaPredicted RBP8.52□□□□□ -1.05
NXF1-212ENST00000531872 TASP1Q9H6P5 420 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 FBRSL1Q9HCM7 1045 aaKnown RBP8.52□□□□□ -1.05
NXF1-212ENST00000531872 HPS4Q9NQG7 708 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 GKN1Q9NS71 199 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 THG1LQ9NWX6 298 aaKnown RBP8.52□□□□□ -1.05
NXF1-212ENST00000531872 NUP205Q92621 2012 aa8.52□□□□□ -1.05
NXF1-212ENST00000531872 ASCC3Q8N3C0 2202 aaKnown RBP8.52□□□□□ -1.05
NXF1-212ENST00000531872 PCNX2A6NKB5 2137 aa8.51□□□□□ -1.05
NXF1-212ENST00000531872 ABCA7Q8IZY2 2146 aa8.51□□□□□ -1.05
NXF1-212ENST00000531872 MTMR11A4FU01 709 aa8.51□□□□□ -1.05
NXF1-212ENST00000531872 ARHGEF35A5YM69 484 aa8.51□□□□□ -1.05
NXF1-212ENST00000531872 FAM221BA6H8Z2 402 aa8.51□□□□□ -1.05
NXF1-212ENST00000531872 OR6C75A6NL08 312 aa8.51□□□□□ -1.05
NXF1-212ENST00000531872 HYAL3O43820 417 aaPredicted RBP8.51□□□□□ -1.05
NXF1-212ENST00000531872 NEMFO60524 1076 aa8.51□□□□□ -1.05
NXF1-212ENST00000531872 CDKL5O76039 1030 aa8.51□□□□□ -1.05
NXF1-212ENST00000531872 APBB3O95704 486 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms