RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 PWP1Q13610 501 aa7.57□□□□□ -1.2
CTNND1-229ENST00000531014 USF2Q15853 346 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-229ENST00000531014 SYTL3Q4VX76 610 aa7.57□□□□□ -1.2
CTNND1-229ENST00000531014 KIAA1755Q5JYT7 1200 aa7.57□□□□□ -1.2
CTNND1-229ENST00000531014 ULK3Q6PHR2 472 aa7.57□□□□□ -1.2
CTNND1-229ENST00000531014 FBXO46Q6PJ61 603 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-229ENST00000531014 ZNF473Q8WTR7 871 aaKnown RBP7.57□□□□□ -1.2
CTNND1-229ENST00000531014 RNF139Q8WU17 664 aa7.57□□□□□ -1.2
CTNND1-229ENST00000531014 CHID1Q9BWS9 393 aa7.57□□□□□ -1.2
CTNND1-229ENST00000531014 UNC45AQ9H3U1 944 aa7.57□□□□□ -1.2
CTNND1-229ENST00000531014 FAM153AQ9UHL3 310 aa7.57□□□□□ -1.2
CTNND1-229ENST00000531014 MOSPD1Q9UJG1 213 aa7.57□□□□□ -1.2
CTNND1-229ENST00000531014 STOML2Q9UJZ1 356 aa7.57□□□□□ -1.2
CTNND1-229ENST00000531014 DSEQ9UL01 958 aa7.57□□□□□ -1.2
CTNND1-229ENST00000531014 PCDHA12Q9UN75 941 aa7.57□□□□□ -1.2
CTNND1-229ENST00000531014 SMG5Q9UPR3 1016 aaKnown RBP7.57□□□□□ -1.2
CTNND1-229ENST00000531014 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.57□□□□□ -1.2
CTNND1-229ENST00000531014 MYPNQ86TC9 1320 aa7.57□□□□□ -1.2
CTNND1-229ENST00000531014 C1orf232A0A0U1RR37 186 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 CARNS1A5YM72 827 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 PIK3CDO00329 1044 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 HOXC6P09630 235 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 MYBL1P10243 752 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 NCALDP61601 193 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 MPP2Q14168 576 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 ABCB5Q2M3G0 1257 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 ANO4Q32M45 955 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 SNX30Q5VWJ9 437 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 RASSF6Q6ZTQ3 369 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 MFN1Q8IWA4 741 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 PLEKHM2Q8IWE5 1019 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 GANCQ8TET4 914 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 IFT43Q96FT9 208 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 SLC13A1Q9BZW2 595 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 EPC1Q9H2F5 836 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 SARS2Q9NP81 518 aaKnown RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 DDX25Q9UHL0 483 aaKnown RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 HERC5Q9UII4 1024 aaKnown RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 PCDHA5Q9Y5H7 936 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 COL16A1Q07092 1604 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 TCP11X1B4DZS4 312 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 CXCL11O14625 94 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 TRIM66O15016 1216 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 AREL1O15033 823 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 EXTL3O43909 919 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 OR52Z1P0C646 297 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 NR2F2P24468 414 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 CCNCP24863 283 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 PSMD4P55036 377 aaKnown RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 SPANXN2Q5MJ10 180 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 THEMIS2Q5TEJ8 643 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 TTC30BQ8N4P2 665 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 PCSK9Q8NBP7 692 aaKnown RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 GPRC5AQ8NFJ5 357 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 SUN5Q8TC36 379 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 SEC16BQ96JE7 1060 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 EURLQ9NYK6 297 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 TUBGCP4Q9UGJ1 667 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 IBTKQ9P2D0 1353 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 HNRNPH1P31943 449 aaKnown RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 CASP4P49662 377 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 ARPC4P59998 168 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 OLR1P78380 273 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 HPCAP84074 193 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 BNC1Q01954 994 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 CUL4AQ13619 759 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 TFDP1Q14186 410 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 KIAA0408Q6ZU52 694 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 ADGRA3Q8IWK6 1321 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 RAB42Q8N4Z0 105 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 CYFIP2Q96F07 1278 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 NOD2Q9HC29 1040 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 KRCC1Q9NPI7 259 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 LIMA1Q9UHB6 759 aaKnown RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 XPO7Q9UIA9 1087 aaKnown RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 BTBD3Q9Y2F9 522 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 B2RBV5 119 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 CHP2O43745 196 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 GFPT2O94808 682 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 PTPN1P18031 435 aaKnown RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 ALOX12P18054 663 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 MDH1P40925 334 aaKnown RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 ARHGDIBP52566 201 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 RAB2AP61019 212 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 TRAP1Q12931 704 aaKnown RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 CCNIQ14094 377 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 OASLQ15646 514 aaKnown RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 MAPK11Q15759 364 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 DGKKQ5KSL6 1271 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 LIN54Q6MZP7 749 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 PDCD6IPQ8WUM4 868 aaKnown RBP7.56□□□□□ -1.2
CTNND1-229ENST00000531014 HES6Q96HZ4 224 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 MLXIPQ9HAP2 919 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 SLC40A1Q9NP59 571 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 VTA1Q9NP79 307 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 BFARQ9NZS9 450 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 CARD8Q9Y2G2 431 aa7.56□□□□□ -1.2
CTNND1-229ENST00000531014 ANO9A1A5B4 782 aa7.55□□□□□ -1.2
CTNND1-229ENST00000531014 TRIM43BA6NCK2 446 aa7.55□□□□□ -1.2
CTNND1-229ENST00000531014 LRRIQ4A6NIV6 560 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms