RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 FAM171A2A8MVW0 826 aa9.02□□□□□ -0.97
CSDE1-213ENST00000530784 XPOTO43592 962 aaKnown RBP9.02□□□□□ -0.97
CSDE1-213ENST00000530784 IL2RBP14784 551 aa9.02□□□□□ -0.97
CSDE1-213ENST00000530784 FPR1P21462 350 aa9.02□□□□□ -0.97
CSDE1-213ENST00000530784 C5AR1P21730 350 aa9.02□□□□□ -0.97
CSDE1-213ENST00000530784 RNASE9P60153 205 aaKnown RBP9.02□□□□□ -0.97
CSDE1-213ENST00000530784 FAM189BP81408 668 aa9.02□□□□□ -0.97
CSDE1-213ENST00000530784 ZCRB1Q8TBF4 217 aaKnown RBP9.02□□□□□ -0.97
CSDE1-213ENST00000530784 CCHCR1Q8TD31 782 aa9.02□□□□□ -0.97
CSDE1-213ENST00000530784 DCLRE1CQ96SD1 692 aaKnown RBP9.02□□□□□ -0.97
CSDE1-213ENST00000530784 SIN3AQ96ST3 1273 aa9.02□□□□□ -0.97
CSDE1-213ENST00000530784 TRPM5Q9NZQ8 1165 aa9.02□□□□□ -0.97
CSDE1-213ENST00000530784 TTC21BQ7Z4L5 1316 aa9.02□□□□□ -0.97
CSDE1-213ENST00000530784 TTC21AQ8NDW8 1320 aa9.02□□□□□ -0.97
CSDE1-213ENST00000530784 KTN1Q86UP2 1357 aaKnown RBP9.01□□□□□ -0.97
CSDE1-213ENST00000530784 SNRPA1P09661 255 aaKnown RBP9.01□□□□□ -0.97
CSDE1-213ENST00000530784 RAP2AP10114 183 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 MGAT1P26572 445 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 ZFP36P26651 326 aaKnown RBP9.01□□□□□ -0.97
CSDE1-213ENST00000530784 ALDH1A3P47895 512 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 RAP2BP61225 183 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 PTPROQ16827 1216 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 ATXN7L2Q5T6C5 722 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-213ENST00000530784 GDF7Q7Z4P5 450 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 ARHGEF25Q86VW2 580 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 NEU4Q8WWR8 484 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-213ENST00000530784 HAS1Q92839 578 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 GPATCH3Q96I76 525 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 MRI1Q9BV20 369 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 TMEM140Q9NV12 185 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 MOCS1Q9NZB8 636 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 CHST2Q9Y4C5 530 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 RGPD3A6NKT7 1758 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-213ENST00000530784 COL18A1P39060 1754 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 RGPD4Q7Z3J3 1758 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 TNKSO95271 1327 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 WNK3Q9BYP7 1800 aa9.01□□□□□ -0.97
CSDE1-213ENST00000530784 NFAT5O94916 1531 aa9□□□□□ -0.97
CSDE1-213ENST00000530784 ABCC6O95255 1503 aa9□□□□□ -0.97
CSDE1-213ENST00000530784 AKAP12Q02952 1782 aa9□□□□□ -0.97
CSDE1-213ENST00000530784 ANKRD62A6NC57 917 aa9□□□□□ -0.97
CSDE1-213ENST00000530784 ZNF185O15231 689 aa9□□□□□ -0.97
CSDE1-213ENST00000530784 ZSCAN20P17040 1043 aaPredicted RBP9□□□□□ -0.97
CSDE1-213ENST00000530784 PCSK1P29120 753 aa9□□□□□ -0.97
CSDE1-213ENST00000530784 PTGS2P35354 604 aa9□□□□□ -0.97
CSDE1-213ENST00000530784 CHN2P52757 468 aa9□□□□□ -0.97
CSDE1-213ENST00000530784 RRP12Q5JTH9 1297 aaKnown RBP9□□□□□ -0.97
CSDE1-213ENST00000530784 LARP4BQ92615 738 aaKnown RBP9□□□□□ -0.97
CSDE1-213ENST00000530784 C7orf25Q9BPX7 421 aa9□□□□□ -0.97
CSDE1-213ENST00000530784 TEX101Q9BY14 249 aa9□□□□□ -0.97
CSDE1-213ENST00000530784 ACTL7AQ9Y615 435 aa9□□□□□ -0.97
CSDE1-213ENST00000530784 BCL9O00512 1426 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 DRGXA6NNA5 263 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 AMY1AP04745 511 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 ADH4P08319 380 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 WASP42768 502 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 FHL2Q14192 279 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 METRNLQ641Q3 311 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 MRGPREQ86SM8 312 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 ZGPATQ8N5A5 531 aaKnown RBP8.99□□□□□ -0.97
CSDE1-213ENST00000530784 CASKIN2Q8WXE0 1202 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 CYFIP2Q96F07 1278 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 PHACTR3Q96KR7 559 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 TEKT5Q96M29 485 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 MYOCQ99972 504 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 SLC46A2Q9BY10 475 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 ASPSCR1Q9BZE9 553 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 FZD1Q9UP38 647 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 MRFAP1Q9Y605 127 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 CCDC7Q96M83 1385 aa8.99□□□□□ -0.97
CSDE1-213ENST00000530784 TNS2Q63HR2 1409 aa8.98□□□□□ -0.97
CSDE1-213ENST00000530784 MON2Q7Z3U7 1717 aa8.98□□□□□ -0.97
CSDE1-213ENST00000530784 GPR32O75388 356 aa8.98□□□□□ -0.97
CSDE1-213ENST00000530784 ATP5JP18859 108 aa8.98□□□□□ -0.97
CSDE1-213ENST00000530784 PTPN21Q16825 1174 aa8.98□□□□□ -0.97
CSDE1-213ENST00000530784 PDCD4Q53EL6 469 aaKnown RBP8.98□□□□□ -0.97
CSDE1-213ENST00000530784 FAM102AQ5T9C2 384 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-213ENST00000530784 RHOUQ7L0Q8 258 aa8.98□□□□□ -0.97
CSDE1-213ENST00000530784 RHOT1Q8IXI2 618 aa8.98□□□□□ -0.97
CSDE1-213ENST00000530784 FAM177A1Q8N128 213 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-213ENST00000530784 LENG9Q96B70 501 aa8.98□□□□□ -0.97
CSDE1-213ENST00000530784 NEU1Q99519 415 aa8.98□□□□□ -0.97
CSDE1-213ENST00000530784 MANSC1Q9H8J5 431 aa8.98□□□□□ -0.97
CSDE1-213ENST00000530784 SLC23A1Q9UHI7 598 aa8.98□□□□□ -0.97
CSDE1-213ENST00000530784 NINLQ9Y2I6 1382 aa8.98□□□□□ -0.97
CSDE1-213ENST00000530784 EXOC5O00471 708 aa8.97□□□□□ -0.97
CSDE1-213ENST00000530784 KRT85P78386 507 aa8.97□□□□□ -0.97
CSDE1-213ENST00000530784 ODF1Q14990 250 aa8.97□□□□□ -0.97
CSDE1-213ENST00000530784 OTUD7BQ6GQQ9 843 aa8.97□□□□□ -0.97
CSDE1-213ENST00000530784 ZNF627Q7L945 461 aa8.97□□□□□ -0.97
CSDE1-213ENST00000530784 PTF1AQ7RTS3 328 aa8.97□□□□□ -0.97
CSDE1-213ENST00000530784 PNMA8AQ86V59 439 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-213ENST00000530784 SYNE4Q8N205 404 aa8.97□□□□□ -0.97
CSDE1-213ENST00000530784 SMAD5Q99717 465 aaKnown RBP8.97□□□□□ -0.97
CSDE1-213ENST00000530784 MRIQ9BWK5 157 aa8.97□□□□□ -0.97
CSDE1-213ENST00000530784 SAP30BPQ9UHR5 308 aaKnown RBP8.97□□□□□ -0.97
CSDE1-213ENST00000530784 RUVBL1Q9Y265 456 aaKnown RBP8.97□□□□□ -0.97
CSDE1-213ENST00000530784 USP15Q9Y4E8 981 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-213ENST00000530784 CD163L1Q9NR16 1453 aa8.96□□□□□ -0.97
CSDE1-213ENST00000530784 DIRC3C9JPN6 131 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms