RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CENPPQ6IPU0 288 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 CYP26C1Q6V0L0 522 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 C15orf39Q6ZRI6 1047 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 TRAPPC11Q7Z392 1133 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 ADHFE1Q8IWW8 467 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 ADSSL1Q8N142 457 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 ZNF461Q8TAF7 563 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 FEZF2Q8TBJ5 459 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 PARD3BQ8TEW8 1205 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 RIPOR3Q96MK2 946 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 NECTIN4Q96NY8 510 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 PHF7Q9BWX1 381 aaPredicted RBP13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 RHOBTB2Q9BYZ6 727 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 ZDHHC7Q9NXF8 308 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 CDH22Q9UJ99 828 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 DSEQ9UL01 958 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 FRMD4BQ9Y2L6 1034 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 C5orf42Q9H799 3197 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 WDR27A2RRH5 827 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 C19orf67A6NJJ6 358 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 OR6C75A6NL08 312 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 RFPL2O75678 378 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 ZMYND10O75800 440 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 CST3P01034 146 aaPredicted RBP13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 WEE2P0C1S8 567 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 ATXN8OSP0DMR3 200 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 BMP6P22004 513 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 ARPP19P56211 112 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 MORC3Q14149 939 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 UVSSAQ2YD98 709 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 TPGS2Q68CL5 300 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 ISM2Q6H9L7 571 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 METTL23Q86XA0 190 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 TMC2Q8TDI7 906 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 ZNF707Q96C28 371 aaPredicted RBP13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 HPDLQ96IR7 371 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 GBP4Q96PP9 640 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 PRKD2Q9BZL6 878 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 LMBRD1Q9NUN5 540 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 GDAP2Q9NXN4 497 aa13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 R3HCC1Q9Y3T6 440 aaKnown RBP13.65□□□□□ -0.22
CCDC90B-216ENST00000529856 LRRIQ3A6PVS8 624 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 AKAP3O75969 853 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 ATF2P15336 505 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 AP3M2P53677 418 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 BFSP1Q12934 665 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 MYO1EQ12965 1108 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 STIM1Q13586 685 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 CAMK4Q16566 473 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 LIN9Q5TKA1 542 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 WSCD1Q658N2 575 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 ANKRD40Q6AI12 368 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 RTL10Q7L3V2 364 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 GJD3Q8N144 294 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 DHTKD1Q96HY7 919 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 POMKQ9H5K3 350 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 CD320Q9NPF0 282 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 MAFFQ9ULX9 164 aa13.64□□□□□ -0.23
CCDC90B-216ENST00000529856 LOC730098B7Z3J9 87 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 PPP1R3GB7ZBB8 358 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 BIN1O00499 593 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 IKBKBO14920 756 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 CETN3O15182 167 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 SEC24AO95486 1093 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 C4BPAP04003 597 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 C8AP07357 584 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 HNRNPA1P09651 372 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 CCNE1P24864 410 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 HOXA9P31269 272 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 ELF1P32519 619 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 PSMC2P35998 433 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 PPP1R2P41236 205 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 MCCD1P59942 119 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 DLG4P78352 724 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 ENPEPQ07075 957 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 GPR17Q13304 367 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 PPM1LQ5SGD2 360 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 RNF19BQ6ZMZ0 732 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 CCDC149Q6ZUS6 474 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 LIMS2Q7Z4I7 341 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 FAM186BQ8IYM0 893 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 TCEAL8Q8IYN2 117 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 THEM5Q8N1Q8 247 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 PDCL2Q8N4E4 241 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 TOP6BLQ8N6T0 577 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 SLC7A14Q8TBB6 771 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 SMG7Q92540 1137 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 TSG101Q99816 390 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 RTP3Q9BQQ7 232 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 AFF4Q9UHB7 1163 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 L1RE1Q9UN81 338 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 SNX9Q9Y5X1 595 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 C2orf16Q68DN1 1984 aa13.63□□□□□ -0.23
CCDC90B-216ENST00000529856 TNFRSF10AO00220 468 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 PSMA7O14818 248 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 HUS1O60921 280 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 PHACTR2O75167 634 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 STAU1O95793 577 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms