RNA–Protein interactions for RNA: ENST00000529582.5

LTBP3-214, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,889 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-214ENST00000529582 MAP2K2P36507 400 aa24.63■■□□□ 1.53
LTBP3-214ENST00000529582 TFAP2BQ92481 460 aa24.63■■□□□ 1.53
LTBP3-214ENST00000529582 SELENOOQ9BVL4 669 aa24.63■■□□□ 1.53
LTBP3-214ENST00000529582 SCN1AP35498 2009 aa24.63■■□□□ 1.53
LTBP3-214ENST00000529582 GRIN2DO15399 1336 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 RRM1P23921 792 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 PPP1R2P3Q6NXS1 205 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 BTBD6Q96KE9 485 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 RNF216Q9NWF9 866 aaPredicted RBP24.62■■□□□ 1.53
LTBP3-214ENST00000529582 TUBGCP4Q9UGJ1 667 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 DDX20Q9UHI6 824 aaKnown RBP24.62■■□□□ 1.53
LTBP3-214ENST00000529582 RAB21Q9UL25 225 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 CEP104O60308 925 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 VEGFBP49765 207 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 RAD23BP54727 409 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 RAET1EQ8TD07 263 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 WHAMMQ8TF30 809 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 C18orf25Q96B23 403 aaPredicted RBP24.62■■□□□ 1.53
LTBP3-214ENST00000529582 VCPIP1Q96JH7 1222 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 RPS6KC1Q96S38 1066 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 C11orf70Q9BRQ4 267 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 RNF39Q9H2S5 420 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 ADAM22Q9P0K1 906 aa24.62■■□□□ 1.53
LTBP3-214ENST00000529582 RNASE9P60153 205 aaKnown RBP24.61■■□□□ 1.53
LTBP3-214ENST00000529582 PTP4A2Q12974 167 aa24.61■■□□□ 1.53
LTBP3-214ENST00000529582 C2CD6Q53TS8 623 aa24.61■■□□□ 1.53
LTBP3-214ENST00000529582 PHLDB2Q86SQ0 1253 aa24.61■■□□□ 1.53
LTBP3-214ENST00000529582 PCSK9Q8NBP7 692 aaKnown RBP24.61■■□□□ 1.53
LTBP3-214ENST00000529582 BEST2Q8NFU1 509 aa24.61■■□□□ 1.53
LTBP3-214ENST00000529582 ACTRT1Q8TDG2 376 aa24.61■■□□□ 1.53
LTBP3-214ENST00000529582 RBM12Q9NTZ6 932 aaKnown RBP24.61■■□□□ 1.53
LTBP3-214ENST00000529582 PCDHGC3Q9UN70 934 aa24.61■■□□□ 1.53
LTBP3-214ENST00000529582 IPPQ9Y573 584 aa24.61■■□□□ 1.53
LTBP3-214ENST00000529582 LSM8O95777 96 aaKnown RBP24.6■■□□□ 1.53
LTBP3-214ENST00000529582 CHRNA1P02708 482 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 PAEPP09466 180 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 COMTP21964 271 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 TNNC1P63316 161 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 C1QBPQ07021 282 aaKnown RBP24.6■■□□□ 1.53
LTBP3-214ENST00000529582 GLRA4Q5JXX5 417 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 LIN9Q5TKA1 542 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 LLGL2Q6P1M3 1020 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 MMS22LQ6ZRQ5 1243 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 RPAINQ86UA6 219 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 SMG8Q8ND04 991 aaKnown RBP24.6■■□□□ 1.53
LTBP3-214ENST00000529582 TWNKQ96RR1 684 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 SENP6Q9GZR1 1112 aaPredicted RBP24.6■■□□□ 1.53
LTBP3-214ENST00000529582 ELOVL4Q9GZR5 314 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 KLK14Q9P0G3 267 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 PARP2Q9UGN5 583 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 CILPO75339 1184 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 CTSHP09668 335 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 MGAT3Q09327 533 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 MYO1EQ12965 1108 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 XKR4Q5GH76 650 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 RASGEF1CQ8N431 466 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 USP38Q8NB14 1042 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 SLC4A11Q8NBS3 891 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 ZNF784Q8NCA9 323 aaPredicted RBP24.6■■□□□ 1.53
LTBP3-214ENST00000529582 PXYLP1Q8TE99 480 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 RNF19AQ9NV58 838 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 HMGXB4Q9UGU5 601 aa24.6■■□□□ 1.53
LTBP3-214ENST00000529582 MIF4GDA9UHW6 222 aaKnown RBP24.59■■□□□ 1.53
LTBP3-214ENST00000529582 PPEF2O14830 753 aa24.59■■□□□ 1.53
LTBP3-214ENST00000529582 RPS6KA5O75582 802 aa24.59■■□□□ 1.53
LTBP3-214ENST00000529582 CD19P15391 556 aa24.59■■□□□ 1.53
LTBP3-214ENST00000529582 BRD3Q15059 726 aa24.59■■□□□ 1.53
LTBP3-214ENST00000529582 TWF2Q6IBS0 349 aaKnown RBP24.59■■□□□ 1.53
LTBP3-214ENST00000529582 UBQLN1Q9UMX0 589 aaKnown RBP24.59■■□□□ 1.53
LTBP3-214ENST00000529582 ST3GAL5Q9UNP4 418 aa24.59■■□□□ 1.53
LTBP3-214ENST00000529582 SMIM28A0A1B0GU29 152 aa24.58■■□□□ 1.53
LTBP3-214ENST00000529582 GNRH1P01148 92 aa24.58■■□□□ 1.53
LTBP3-214ENST00000529582 RPLP2P05387 115 aaKnown RBP24.58■■□□□ 1.53
LTBP3-214ENST00000529582 CDH5P33151 784 aaPredicted RBP24.58■■□□□ 1.53
LTBP3-214ENST00000529582 ORC1Q13415 861 aa24.58■■□□□ 1.53
LTBP3-214ENST00000529582 PTGISQ16647 500 aa24.58■■□□□ 1.53
LTBP3-214ENST00000529582 DCAF12L1Q5VU92 463 aa24.58■■□□□ 1.53
LTBP3-214ENST00000529582 CPNE8Q86YQ8 564 aa24.58■■□□□ 1.53
LTBP3-214ENST00000529582 TMEM35BQ8NCS4 154 aa24.58■■□□□ 1.53
LTBP3-214ENST00000529582 C1orf131Q8NDD1 294 aaKnown RBP24.58■■□□□ 1.53
LTBP3-214ENST00000529582 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.58■■□□□ 1.531e-10■□□□□ 10.7
LTBP3-214ENST00000529582 ZNF446Q9NWS9 450 aa24.58■■□□□ 1.53
LTBP3-214ENST00000529582 ANAPC7Q9UJX3 599 aa24.58■■□□□ 1.53
LTBP3-214ENST00000529582 TARSL2A2RTX5 802 aaKnown RBP24.58■■□□□ 1.52
LTBP3-214ENST00000529582 TLR3O15455 904 aaKnown RBP24.58■■□□□ 1.52
LTBP3-214ENST00000529582 MED7O43513 233 aa24.58■■□□□ 1.52
LTBP3-214ENST00000529582 KCNE1P15382 129 aa24.58■■□□□ 1.52
LTBP3-214ENST00000529582 MMP8P22894 467 aa24.58■■□□□ 1.52
LTBP3-214ENST00000529582 YY1P25490 414 aa24.58■■□□□ 1.52
LTBP3-214ENST00000529582 VSNL1P62760 191 aa24.58■■□□□ 1.52
LTBP3-214ENST00000529582 INCA1Q0VD86 236 aa24.58■■□□□ 1.52
LTBP3-214ENST00000529582 DENND1BQ6P3S1 775 aa24.58■■□□□ 1.52
LTBP3-214ENST00000529582 RNF180Q86T96 592 aa24.58■■□□□ 1.52
LTBP3-214ENST00000529582 WDTC1Q8N5D0 677 aa24.58■■□□□ 1.52
LTBP3-214ENST00000529582 TMEM176AQ96HP8 235 aa24.58■■□□□ 1.52
LTBP3-214ENST00000529582 TSPAN18Q96SJ8 248 aa24.58■■□□□ 1.52
LTBP3-214ENST00000529582 ZNF518BQ9C0D4 1074 aa24.58■■□□□ 1.52
LTBP3-214ENST00000529582 PGRMC1O00264 195 aaKnown RBP24.57■■□□□ 1.52
LTBP3-214ENST00000529582 TUBBP07437 444 aa24.57■■□□□ 1.52
LTBP3-214ENST00000529582 PTPN11Q06124 597 aaPredicted RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms