RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 MYBPHLA2RUH7 354 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 CCDC169A6NNP5 214 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 ARNTLO00327 626 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 NRG2O14511 850 aaPredicted RBP9.83□□□□□ -0.84
VPS11-203ENST00000529545 PFKFB2O60825 505 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 MOSPD3O75425 235 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 MED24O75448 989 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 RPP40O75818 363 aaKnown RBP9.83□□□□□ -0.84
VPS11-203ENST00000529545 EDN1P05305 212 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 CCDC192P0DO97 292 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 RPA1P27694 616 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 CTHP32929 405 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 ALDH1A3P47895 512 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 FCHO2Q0JRZ9 810 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 PTPAQ15257 358 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 SF3A2Q15428 464 aaKnown RBP9.83□□□□□ -0.84
VPS11-203ENST00000529545 ARHGAP29Q52LW3 1261 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 STPG1Q5TH74 334 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 ALKAL1Q6UXT8 129 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 Q6ZS52 159 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 CACNA2D4Q7Z3S7 1137 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 SHKBP1Q8TBC3 707 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 TNFRSF25Q93038 417 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 SUSD3Q96L08 255 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 KIFC3Q9BVG8 833 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 OXCT2Q9BYC2 517 aaPredicted RBP9.83□□□□□ -0.84
VPS11-203ENST00000529545 MRPL4Q9BYD3 311 aaKnown RBP9.83□□□□□ -0.84
VPS11-203ENST00000529545 TPCN1Q9ULQ1 816 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 A0A1W2PRU2 124 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 BTBD18B2RXH4 712 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 ATG13O75143 517 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 FGF19O95750 216 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 MCF2P10911 925 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 KCNE1P15382 129 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 MUTP22033 750 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 MCM7P33993 719 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 MLLT3P42568 568 aaPredicted RBP9.82□□□□□ -0.84
VPS11-203ENST00000529545 SOX9P48436 509 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 PON2Q15165 354 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 ARHGAP15Q53QZ3 475 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 XKR4Q5GH76 650 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 HAUS3Q68CZ6 603 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 RNF19BQ6ZMZ0 732 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 USP37Q86T82 979 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 ARID3BQ8IVW6 561 aaPredicted RBP9.82□□□□□ -0.84
VPS11-203ENST00000529545 DIS3L2Q8IYB7 885 aaKnown RBP9.82□□□□□ -0.84
VPS11-203ENST00000529545 CEP120Q8N960 986 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 TTC8Q8TAM2 541 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 GAB3Q8WWW8 586 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 TBC1D32Q96NH3 1257 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 ACO2Q99798 780 aaKnown RBP9.82□□□□□ -0.84
VPS11-203ENST00000529545 CDT1Q9H211 546 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 SH2B1Q9NRF2 756 aaPredicted RBP9.82□□□□□ -0.84
VPS11-203ENST00000529545 THG1LQ9NWX6 298 aaKnown RBP9.82□□□□□ -0.84
VPS11-203ENST00000529545 SLC8A2Q9UPR5 921 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 YIPF1Q9Y548 306 aa9.82□□□□□ -0.84
VPS11-203ENST00000529545 CCDC163A0A0D9SF12 145 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 TM4SF5O14894 197 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 EPN2O95208 641 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 KCNK5O95279 499 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 PROS1P07225 676 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 CCT6AP40227 531 aaKnown RBP9.81□□□□□ -0.84
VPS11-203ENST00000529545 YWHAHQ04917 246 aaPredicted RBP9.81□□□□□ -0.84
VPS11-203ENST00000529545 DMP1Q13316 513 aaPredicted RBP9.81□□□□□ -0.84
VPS11-203ENST00000529545 CCINQ13939 588 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 ANKRD1Q15327 319 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 SAFBQ15424 915 aaKnown RBP eCLIP9.81□□□□□ -0.84
VPS11-203ENST00000529545 CCDC6Q16204 474 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 ITPRIPL2Q3MIP1 535 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 RNF43Q68DV7 783 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 TXNDC11Q6PKC3 985 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 ITIH5Q86UX2 942 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 GPIHBP1Q8IV16 184 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 C18orf25Q96B23 403 aaPredicted RBP9.81□□□□□ -0.84
VPS11-203ENST00000529545 RSPRY1Q96DX4 576 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 ZMAT2Q96NC0 199 aaKnown RBP9.81□□□□□ -0.84
VPS11-203ENST00000529545 LSM14BQ9BX40 385 aaKnown RBP9.81□□□□□ -0.84
VPS11-203ENST00000529545 TMEM60Q9H2L4 133 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 BHMT2Q9H2M3 363 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 ATXN3LQ9H3M9 355 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 TMEM134Q9H6X4 195 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 POLD4Q9HCU8 107 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 VPS45Q9NRW7 570 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 OBP2AQ9NY56 170 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 GTSE1Q9NYZ3 720 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 CNTN3Q9P232 1028 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 RBM19Q9Y4C8 960 aaKnown RBP9.81□□□□□ -0.84
VPS11-203ENST00000529545 ASB3Q9Y575 518 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 PCDHGA5Q9Y5G8 931 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.81□□□□□ -0.84
VPS11-203ENST00000529545 CITO14578 2027 aa9.81□□□□□ -0.84
VPS11-203ENST00000529545 CNOT1A5YKK6 2376 aaKnown RBP9.81□□□□□ -0.84
VPS11-203ENST00000529545 OR6C75A6NL08 312 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 DTNBO60941 627 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 AKAP3O75969 853 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 OAZ2O95190 189 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 CTDNEP1O95476 244 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 OR52Z1P0C646 297 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 HARSP12081 509 aaKnown RBP9.8□□□□□ -0.84
VPS11-203ENST00000529545 MPLP40238 635 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms