RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 C4orf47A7E2U8 309 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 K7ERI5 159 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 DPYSL4O14531 572 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 DCLK1O15075 740 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 KCNE1P15382 129 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 EFNA5P52803 228 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 ARHGAP29Q52LW3 1261 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 GPR158Q5T848 1215 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 FSTL4Q6MZW2 842 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 BEST2Q8NFU1 509 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 ZBTB45Q96K62 511 aaPredicted RBP20.74■□□□□ 0.91
SSRP1-204ENST00000529002 IFT74Q96LB3 600 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 ACAP3Q96P50 834 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 POLR3CQ9BUI4 534 aaPredicted RBP20.74■□□□□ 0.91
SSRP1-204ENST00000529002 TMEM121BQ9BXQ6 578 aaPredicted RBP20.74■□□□□ 0.91
SSRP1-204ENST00000529002 ATXN3LQ9H3M9 355 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 PCDHB8Q9UN66 801 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 ABLIM1O14639 778 aa20.73■□□□□ 0.91
SSRP1-204ENST00000529002 PFKFB2O60825 505 aa20.73■□□□□ 0.91
SSRP1-204ENST00000529002 RPL9P32969 192 aaKnown RBP20.73■□□□□ 0.91
SSRP1-204ENST00000529002 MCM7P33993 719 aa20.73■□□□□ 0.91
SSRP1-204ENST00000529002 CYP4F8P98187 520 aa20.73■□□□□ 0.91
SSRP1-204ENST00000529002 SPAG1Q07617 926 aa20.73■□□□□ 0.91
SSRP1-204ENST00000529002 PLK5Q496M5 336 aa20.73■□□□□ 0.91
SSRP1-204ENST00000529002 APPL2Q8NEU8 664 aa20.73■□□□□ 0.91
SSRP1-204ENST00000529002 CHFRQ96EP1 664 aa20.73■□□□□ 0.91
SSRP1-204ENST00000529002 HHIPQ96QV1 700 aa20.73■□□□□ 0.91
SSRP1-204ENST00000529002 EDEM2Q9BV94 578 aa20.73■□□□□ 0.91
SSRP1-204ENST00000529002 CNTN3Q9P232 1028 aa20.73■□□□□ 0.91
SSRP1-204ENST00000529002 WASF3Q9UPY6 502 aa20.73■□□□□ 0.91
SSRP1-204ENST00000529002 MYH11P35749 1972 aa20.73■□□□□ 0.91
SSRP1-204ENST00000529002 CCDC169A6NNP5 214 aa20.72■□□□□ 0.91
SSRP1-204ENST00000529002 REC8O95072 547 aa20.72■□□□□ 0.91
SSRP1-204ENST00000529002 GABRR2P28476 465 aa20.72■□□□□ 0.91
SSRP1-204ENST00000529002 MARCKSP29966 332 aaPredicted RBP20.72■□□□□ 0.91
SSRP1-204ENST00000529002 ZNF252P-AS1Q0IIN9 211 aa20.72■□□□□ 0.91
SSRP1-204ENST00000529002 APBB1IPQ7Z5R6 666 aaPredicted RBP20.72■□□□□ 0.91
SSRP1-204ENST00000529002 SYNPOQ8N3V7 929 aa20.72■□□□□ 0.91
SSRP1-204ENST00000529002 ATAD1Q8NBU5 361 aa20.72■□□□□ 0.91
SSRP1-204ENST00000529002 TMEM209Q96SK2 561 aa20.72■□□□□ 0.91
SSRP1-204ENST00000529002 DUSP15Q9H1R2 295 aaPredicted RBP20.72■□□□□ 0.91
SSRP1-204ENST00000529002 BHMT2Q9H2M3 363 aa20.72■□□□□ 0.91
SSRP1-204ENST00000529002 BRMS1Q9HCU9 246 aa20.72■□□□□ 0.91
SSRP1-204ENST00000529002 SLC8A2Q9UPR5 921 aa20.72■□□□□ 0.91
SSRP1-204ENST00000529002 KIAA1549LQ6ZVL6 1849 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 OTOL1A6NHN0 477 aaPredicted RBP20.71■□□□□ 0.91
SSRP1-204ENST00000529002 RPA1P27694 616 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 EPHB3P54753 998 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 PEX3P56589 373 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 SLC10A6Q3KNW5 377 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 NAIF1Q69YI7 327 aaPredicted RBP20.71■□□□□ 0.91
SSRP1-204ENST00000529002 HAUS6Q7Z4H7 955 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 DNAJB7Q7Z6W7 309 aaPredicted RBP20.71■□□□□ 0.91
SSRP1-204ENST00000529002 DIS3L2Q8IYB7 885 aaKnown RBP20.71■□□□□ 0.91
SSRP1-204ENST00000529002 NECAB1Q8N987 351 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 KDF1Q8NAX2 398 aaPredicted RBP20.71■□□□□ 0.91
SSRP1-204ENST00000529002 BPIFB1Q8TDL5 484 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 ZC3H10Q96K80 434 aaKnown RBP20.71■□□□□ 0.91
SSRP1-204ENST00000529002 TCHPQ9BT92 498 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 TM6SF1Q9BZW5 370 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 FBRSL1Q9HCM7 1045 aaKnown RBP20.71■□□□□ 0.91
SSRP1-204ENST00000529002 VPS45Q9NRW7 570 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 MAFFQ9ULX9 164 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 PCDHGA5Q9Y5G8 931 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 PKD1L2Q7Z442 2459 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 OBSL1O75147 1896 aa20.71■□□□□ 0.91
SSRP1-204ENST00000529002 GON4LQ3T8J9 2241 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 AKAP13Q12802 2813 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 PCNX2A6NKB5 2137 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 EGFP01133 1207 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 U2AF2P26368 475 aaKnown RBP eCLIP20.7■□□□□ 0.9
SSRP1-204ENST00000529002 NPTX2P47972 431 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 CREB5Q02930 508 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 YWHAHQ04917 246 aaPredicted RBP20.7■□□□□ 0.9
SSRP1-204ENST00000529002 ACAP1Q15027 740 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 ITPRIPL2Q3MIP1 535 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 SH3PXD2AQ5TCZ1 1133 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 TRIM68Q6AZZ1 485 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 CENPPQ6IPU0 288 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 LPIN3Q9BQK8 851 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 HPS4Q9NQG7 708 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 GKN1Q9NS71 199 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 INVSQ9Y283 1065 aa20.7■□□□□ 0.9
SSRP1-204ENST00000529002 TSC2P49815 1807 aa20.69■□□□□ 0.9
SSRP1-204ENST00000529002 MTMR11A4FU01 709 aa20.69■□□□□ 0.9
SSRP1-204ENST00000529002 M0QZQ0 153 aa20.69■□□□□ 0.9
SSRP1-204ENST00000529002 RNF40O75150 1001 aa20.69■□□□□ 0.9
SSRP1-204ENST00000529002 OAZ2O95190 189 aa20.69■□□□□ 0.9
SSRP1-204ENST00000529002 PROZP22891 400 aa20.69■□□□□ 0.9
SSRP1-204ENST00000529002 ALDH1A3P47895 512 aa20.69■□□□□ 0.9
SSRP1-204ENST00000529002 GUCY2FP51841 1108 aa20.69■□□□□ 0.9
SSRP1-204ENST00000529002 TMEM196Q5HYL7 178 aa20.69■□□□□ 0.9
SSRP1-204ENST00000529002 DAW1Q8N136 415 aa20.69■□□□□ 0.9
SSRP1-204ENST00000529002 KIFAP3Q92845 792 aa20.69■□□□□ 0.9
SSRP1-204ENST00000529002 MRPL4Q9BYD3 311 aaKnown RBP20.69■□□□□ 0.9
SSRP1-204ENST00000529002 ADAM33Q9BZ11 813 aa20.69■□□□□ 0.9
SSRP1-204ENST00000529002 PHLPP2Q6ZVD8 1323 aa20.69■□□□□ 0.9
SSRP1-204ENST00000529002 PI4KAP42356 2102 aa20.68■□□□□ 0.9
SSRP1-204ENST00000529002 CCDC163A0A0D9SF12 145 aa20.68■□□□□ 0.9
SSRP1-204ENST00000529002 SRRM3A6NNA2 597 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms