RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 PWP1Q13610 501 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 USF2Q15853 346 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 SYTL3Q4VX76 610 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 KIAA1755Q5JYT7 1200 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 ULK3Q6PHR2 472 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 FBXO46Q6PJ61 603 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 ZNF473Q8WTR7 871 aaKnown RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 RNF139Q8WU17 664 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 CHID1Q9BWS9 393 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 UNC45AQ9H3U1 944 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 FAM153AQ9UHL3 310 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 MOSPD1Q9UJG1 213 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 STOML2Q9UJZ1 356 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 DSEQ9UL01 958 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 PCDHA12Q9UN75 941 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 SMG5Q9UPR3 1016 aaKnown RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 MYPNQ86TC9 1320 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 C1orf232A0A0U1RR37 186 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 CARNS1A5YM72 827 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 PIK3CDO00329 1044 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 HOXC6P09630 235 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 MYBL1P10243 752 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 NCALDP61601 193 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 MPP2Q14168 576 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 ABCB5Q2M3G0 1257 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 ANO4Q32M45 955 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 SNX30Q5VWJ9 437 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 RASSF6Q6ZTQ3 369 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 MFN1Q8IWA4 741 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 PLEKHM2Q8IWE5 1019 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 GANCQ8TET4 914 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 IFT43Q96FT9 208 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 SLC13A1Q9BZW2 595 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 EPC1Q9H2F5 836 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 SARS2Q9NP81 518 aaKnown RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 DDX25Q9UHL0 483 aaKnown RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 HERC5Q9UII4 1024 aaKnown RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 PCDHA5Q9Y5H7 936 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 COL16A1Q07092 1604 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 TCP11X1B4DZS4 312 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 CXCL11O14625 94 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 TRIM66O15016 1216 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 AREL1O15033 823 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 EXTL3O43909 919 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 OR52Z1P0C646 297 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 NR2F2P24468 414 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 CCNCP24863 283 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 PSMD4P55036 377 aaKnown RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 SPANXN2Q5MJ10 180 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 THEMIS2Q5TEJ8 643 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 TTC30BQ8N4P2 665 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 PCSK9Q8NBP7 692 aaKnown RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 GPRC5AQ8NFJ5 357 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 SUN5Q8TC36 379 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 SEC16BQ96JE7 1060 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 EURLQ9NYK6 297 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 TUBGCP4Q9UGJ1 667 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 IBTKQ9P2D0 1353 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 HNRNPH1P31943 449 aaKnown RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 CASP4P49662 377 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 ARPC4P59998 168 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 OLR1P78380 273 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 HPCAP84074 193 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 BNC1Q01954 994 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 CUL4AQ13619 759 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 TFDP1Q14186 410 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 KIAA0408Q6ZU52 694 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 ADGRA3Q8IWK6 1321 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 RAB42Q8N4Z0 105 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 CYFIP2Q96F07 1278 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 NOD2Q9HC29 1040 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 KRCC1Q9NPI7 259 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 LIMA1Q9UHB6 759 aaKnown RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 XPO7Q9UIA9 1087 aaKnown RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 BTBD3Q9Y2F9 522 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 B2RBV5 119 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 CHP2O43745 196 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 GFPT2O94808 682 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 PTPN1P18031 435 aaKnown RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 ALOX12P18054 663 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 MDH1P40925 334 aaKnown RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 ARHGDIBP52566 201 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 RAB2AP61019 212 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 TRAP1Q12931 704 aaKnown RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 CCNIQ14094 377 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 OASLQ15646 514 aaKnown RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 MAPK11Q15759 364 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 DGKKQ5KSL6 1271 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 LIN54Q6MZP7 749 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 PDCD6IPQ8WUM4 868 aaKnown RBP7.56□□□□□ -1.2
CTNND1-216ENST00000527467 HES6Q96HZ4 224 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 MLXIPQ9HAP2 919 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 SLC40A1Q9NP59 571 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 VTA1Q9NP79 307 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 BFARQ9NZS9 450 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 CARD8Q9Y2G2 431 aa7.56□□□□□ -1.2
CTNND1-216ENST00000527467 ANO9A1A5B4 782 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 TRIM43BA6NCK2 446 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 LRRIQ4A6NIV6 560 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms