RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 POLR2BP30876 1174 aaKnown RBP20.11■□□□□ 0.81
SMPD1-203ENST00000527275 BMS1Q14692 1282 aaKnown RBP20.11■□□□□ 0.81
SMPD1-203ENST00000527275 CLLU1OSQ5K130 101 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 ALKBH5Q6P6C2 394 aaKnown RBP20.11■□□□□ 0.81
SMPD1-203ENST00000527275 PPM1KQ8N3J5 372 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 BEST2Q8NFU1 509 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 NT5C1BQ96P26 610 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 ALS2CR12Q96Q35 445 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 XYLT2Q9H1B5 865 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 ITGA11Q9UKX5 1188 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 JRKLQ9Y4A0 524 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 SAR1BQ9Y6B6 198 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 CLSTN1O94985 981 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 POMCP01189 267 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 THP07101 528 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 NAP1L1P55209 391 aaKnown RBP20.1■□□□□ 0.81
SMPD1-203ENST00000527275 NOP14P78316 857 aaKnown RBP20.1■□□□□ 0.81
SMPD1-203ENST00000527275 SGSM1Q2NKQ1 1148 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 WDR44Q5JSH3 913 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.1■□□□□ 0.81
SMPD1-203ENST00000527275 CRIPAKQ8N1N5 446 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 NOX5Q96PH1 765 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 PACSIN1Q9BY11 444 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 IMPG2Q9BZV3 1241 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 ELAC1Q9H777 363 aaKnown RBP20.1■□□□□ 0.81
SMPD1-203ENST00000527275 APOBEC3GQ9HC16 384 aaKnown RBP20.1■□□□□ 0.81
SMPD1-203ENST00000527275 PUF60Q9UHX1 559 aaKnown RBP20.1■□□□□ 0.81
SMPD1-203ENST00000527275 AGAP1Q9UPQ3 857 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 PCDHB7Q9Y5E2 793 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 MICAL3Q7RTP6 2002 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 ZC3H11AO75152 810 aaKnown RBP eCLIP20.1■□□□□ 0.81
SMPD1-203ENST00000527275 GLB1LQ6UWU2 654 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 RPUSD2Q8IZ73 545 aaKnown RBP20.1■□□□□ 0.81
SMPD1-203ENST00000527275 HELQQ8TDG4 1101 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 BADQ92934 168 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 HTATIP2Q9BUP3 242 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 NUB1Q9Y5A7 615 aa20.1■□□□□ 0.81
SMPD1-203ENST00000527275 DDX3XO00571 662 aaKnown RBP eCLIP20.09■□□□□ 0.811e-11■■■■■ 63
SMPD1-203ENST00000527275 XPOTO43592 962 aaKnown RBP20.09■□□□□ 0.81
SMPD1-203ENST00000527275 BUB1O43683 1085 aa20.09■□□□□ 0.81
SMPD1-203ENST00000527275 SYN1P17600 705 aa20.09■□□□□ 0.81
SMPD1-203ENST00000527275 RSRC2Q7L4I2 434 aaKnown RBP20.09■□□□□ 0.81
SMPD1-203ENST00000527275 KAT5Q92993 513 aa20.09■□□□□ 0.81
SMPD1-203ENST00000527275 NENFQ9UMX5 172 aa20.09■□□□□ 0.81
SMPD1-203ENST00000527275 RBP5P82980 135 aa20.08■□□□□ 0.81
SMPD1-203ENST00000527275 ZNF699Q32M78 642 aa20.08■□□□□ 0.81
SMPD1-203ENST00000527275 MTERF4Q7Z6M4 381 aaKnown RBP20.08■□□□□ 0.81
SMPD1-203ENST00000527275 GOLGA1Q92805 767 aa20.08■□□□□ 0.81
SMPD1-203ENST00000527275 ARID3AQ99856 593 aa20.08■□□□□ 0.81
SMPD1-203ENST00000527275 SLC38A7Q9NVC3 462 aa20.08■□□□□ 0.81
SMPD1-203ENST00000527275 CACNG4Q9UBN1 327 aa20.08■□□□□ 0.81
SMPD1-203ENST00000527275 SCN1AP35498 2009 aa20.08■□□□□ 0.81
SMPD1-203ENST00000527275 ABHD14A-ACY1A0A1B0GW23 586 aa20.08■□□□□ 0.8
SMPD1-203ENST00000527275 PPEF2O14830 753 aa20.08■□□□□ 0.8
SMPD1-203ENST00000527275 CYP3A5P20815 502 aa20.08■□□□□ 0.8
SMPD1-203ENST00000527275 C9orf57Q5W0N0 161 aa20.08■□□□□ 0.8
SMPD1-203ENST00000527275 PDCL2Q8N4E4 241 aa20.08■□□□□ 0.8
SMPD1-203ENST00000527275 SLC30A5Q8TAD4 765 aa20.08■□□□□ 0.8
SMPD1-203ENST00000527275 KREMEN1Q96MU8 473 aa20.08■□□□□ 0.8
SMPD1-203ENST00000527275 LRFN2Q9ULH4 789 aa20.08■□□□□ 0.8
SMPD1-203ENST00000527275 INPPL1O15357 1258 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 PFKMP08237 780 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 WDR72Q3MJ13 1102 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 TEX35Q5T0J7 233 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 C16orf59Q7L2K0 433 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 LNX1Q8TBB1 728 aaPredicted RBP20.07■□□□□ 0.8
SMPD1-203ENST00000527275 HPDLQ96IR7 371 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 IL23AQ9NPF7 189 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 RANBP2P49792 3224 aaKnown RBP20.07■□□□□ 0.8
SMPD1-203ENST00000527275 BTNL10A8MVZ5 291 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 SRGAP2O75044 1071 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 MFAP3P55082 362 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 GCNT1Q02742 428 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 OTOP2Q7RTS6 562 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 DPF3Q92784 378 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 SYT11Q9BT88 431 aa20.07■□□□□ 0.8
SMPD1-203ENST00000527275 NXF1Q9UBU9 619 aaKnown RBP20.07■□□□□ 0.8
SMPD1-203ENST00000527275 TDRD15B5MCY1 1934 aaKnown RBP20.06■□□□□ 0.8
SMPD1-203ENST00000527275 PIRO00625 290 aa20.06■□□□□ 0.8
SMPD1-203ENST00000527275 UPP2O95045 317 aa20.06■□□□□ 0.8
SMPD1-203ENST00000527275 TNFAIP3P21580 790 aa20.06■□□□□ 0.8
SMPD1-203ENST00000527275 GATMP50440 423 aa20.06■□□□□ 0.8
SMPD1-203ENST00000527275 GRIK3Q13003 919 aa20.06■□□□□ 0.8
SMPD1-203ENST00000527275 NOMO2Q5JPE7 1267 aa20.06■□□□□ 0.8
SMPD1-203ENST00000527275 GLYCTKQ8IVS8 523 aa20.06■□□□□ 0.8
SMPD1-203ENST00000527275 ABI1Q8IZP0 508 aa20.06■□□□□ 0.8
SMPD1-203ENST00000527275 OLIG1Q8TAK6 271 aa20.06■□□□□ 0.8
SMPD1-203ENST00000527275 ZMYND8Q9ULU4 1186 aaPredicted RBP20.06■□□□□ 0.8
SMPD1-203ENST00000527275 CTAGE15A4D2H0 777 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 H2AFZP0C0S5 128 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 CTAGE8P0CG41 777 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 ATICP31939 592 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 FPGSQ05932 587 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 H2AFVQ71UI9 128 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 CTAGE6Q86UF2 777 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 DNAAF5Q86Y56 855 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 CTAGE4Q8IX94 777 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 RABGGTAQ92696 567 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 TAF4BQ92750 862 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 PAAF1Q9BRP4 392 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms