RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 ADAM9Q13443 819 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 CBX2Q14781 532 aaPredicted RBP13.96□□□□□ -0.17
CTSB-209ENST00000525315 EDRF1Q3B7T1 1238 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 SV2CQ496J9 727 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 ZNF280DQ6N043 979 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 TMC5Q6UXY8 1006 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 TRAPPC11Q7Z392 1133 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 USP37Q86T82 979 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 FEZF2Q8TBJ5 459 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 CCDC127Q96BQ5 260 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 RIPOR3Q96MK2 946 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 ZNF560Q96MR9 790 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 NECTIN4Q96NY8 510 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 PHF7Q9BWX1 381 aaPredicted RBP13.96□□□□□ -0.17
CTSB-209ENST00000525315 ZDHHC7Q9NXF8 308 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 GDAP2Q9NXN4 497 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 MAN1B1Q9UKM7 699 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 MAFFQ9ULX9 164 aa13.96□□□□□ -0.17
CTSB-209ENST00000525315 WDR27A2RRH5 827 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 OR6C75A6NL08 312 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 RFPL2O75678 378 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 HNRNPA1P09651 372 aaKnown RBP eCLIP13.95□□□□□ -0.18
CTSB-209ENST00000525315 DLATP10515 647 aaKnown RBP13.95□□□□□ -0.18
CTSB-209ENST00000525315 ATF2P15336 505 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 BMP6P22004 513 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 ZP2Q05996 745 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 MORC3Q14149 939 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 TPGS2Q68CL5 300 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 OVOS1Q6IE37 1185 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 ADSSL1Q8N142 457 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 TMC2Q8TDI7 906 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 ZNF707Q96C28 371 aaPredicted RBP13.95□□□□□ -0.18
CTSB-209ENST00000525315 PRKD2Q9BZL6 878 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 CD320Q9NPF0 282 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 LMBRD1Q9NUN5 540 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 CDH22Q9UJ99 828 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 DSEQ9UL01 958 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 FRMD4BQ9Y2L6 1034 aa13.95□□□□□ -0.18
CTSB-209ENST00000525315 CUL9Q8IWT3 2517 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 LRRIQ3A6PVS8 624 aaPredicted RBP13.94□□□□□ -0.18
CTSB-209ENST00000525315 LOC730098B7Z3J9 87 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 IKBKBO14920 756 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 C4BPAP04003 597 aaKnown RBP13.94□□□□□ -0.18
CTSB-209ENST00000525315 KRT19P08727 400 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 WEE2P0C1S8 567 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 NR2F2P24468 414 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 HOXA9P31269 272 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 AP3M2P53677 418 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 ENPEPQ07075 957 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 MYO1EQ12965 1108 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 CEP135Q66GS9 1140 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 ANKRD40Q6AI12 368 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 ISM2Q6H9L7 571 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 CCDC149Q6ZUS6 474 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 DPH6Q7L8W6 267 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 LIMS2Q7Z4I7 341 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 ZC3H3Q8IXZ2 948 aaKnown RBP13.94□□□□□ -0.18
CTSB-209ENST00000525315 TCEAL8Q8IYN2 117 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 GJD3Q8N144 294 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 POMKQ9H5K3 350 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 KIAA1468Q9P260 1216 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 DOCK8Q8NF50 2099 aa13.94□□□□□ -0.18
CTSB-209ENST00000525315 SPDYE4A6NLX3 237 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 PPP1R3GB7ZBB8 358 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 TNFRSF10AO00220 468 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 HUS1O60921 280 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 AKAP3O75969 853 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 SEC24AO95486 1093 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 C8AP07357 584 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 POU2F2P09086 479 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 PSMC2P35998 433 aaKnown RBP13.93□□□□□ -0.18
CTSB-209ENST00000525315 PPP1R2P41236 205 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 ARPP19P56211 112 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 DLG4P78352 724 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 BFSP1Q12934 665 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 GPR17Q13304 367 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 PPM1LQ5SGD2 360 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 C1orf220Q5T0J3 134 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 LIN9Q5TKA1 542 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 WSCD1Q658N2 575 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 METTL23Q86XA0 190 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 TMEM86AQ8N2M4 240 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 TOP6BLQ8N6T0 577 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 SPATA18Q8TC71 538 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 DHTKD1Q96HY7 919 aaPredicted RBP13.93□□□□□ -0.18
CTSB-209ENST00000525315 HPDLQ96IR7 371 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 RTP3Q9BQQ7 232 aa13.93□□□□□ -0.18
CTSB-209ENST00000525315 AFF4Q9UHB7 1163 aaKnown RBP13.93□□□□□ -0.18
CTSB-209ENST00000525315 R3HCC1Q9Y3T6 440 aaKnown RBP13.93□□□□□ -0.18
CTSB-209ENST00000525315 GABRDO14764 452 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 CETN3O15182 167 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 VNN2O95498 520 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 STAU1O95793 577 aaKnown RBP13.92□□□□□ -0.18
CTSB-209ENST00000525315 FAM163BP0C2L3 166 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
CTSB-209ENST00000525315 CCNE1P24864 410 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 ATICP31939 592 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 VAMP7P51809 220 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 PMS1P54277 932 aaKnown RBP13.92□□□□□ -0.18
CTSB-209ENST00000525315 FKBP3Q00688 224 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms