RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 LMBRD1Q9NUN5 540 aa5.81□□□□□ -1.48
HMGB1P40-201ENST00000525121 DMAC2Q9NW81 257 aa5.81□□□□□ -1.48
HMGB1P40-201ENST00000525121 ZDHHC7Q9NXF8 308 aa5.81□□□□□ -1.48
HMGB1P40-201ENST00000525121 PRKAG3Q9UGI9 489 aa5.81□□□□□ -1.48
HMGB1P40-201ENST00000525121 ARMCX3Q9UH62 379 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P40-201ENST00000525121 FBXW11Q9UKB1 542 aa5.81□□□□□ -1.48
HMGB1P40-201ENST00000525121 MAFFQ9ULX9 164 aa5.81□□□□□ -1.48
HMGB1P40-201ENST00000525121 CTNND2Q9UQB3 1225 aa5.81□□□□□ -1.48
HMGB1P40-201ENST00000525121 USP15Q9Y4E8 981 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P40-201ENST00000525121 SNX9Q9Y5X1 595 aa5.81□□□□□ -1.48
HMGB1P40-201ENST00000525121 PLXNA4Q9HCM2 1894 aa5.81□□□□□ -1.48
HMGB1P40-201ENST00000525121 TDRD15B5MCY1 1934 aaKnown RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 GRXCR2A6NFK2 248 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 LRRIQ3A6PVS8 624 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 PPEF2O14830 753 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 SPTLC1O15269 473 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 MBTPS2O43462 519 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 N4BP1O75113 896 aaKnown RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 AKAP3O75969 853 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 OAZ2O95190 189 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 CYP11A1P05108 521 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 C8AP07357 584 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 SPATA31D3P0C874 917 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 HOXA9P31269 272 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 SSTR3P32745 418 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 GTF2H1P32780 548 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 LTBRP36941 435 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 LHX1P48742 406 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 CASP4P49662 377 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 WNT7BP56706 349 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 RBM10P98175 930 aaKnown RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 ROR1Q01973 937 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 DLX2Q07687 328 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 CETN1Q12798 172 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 SMARCB1Q12824 385 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 PLD1Q13393 1074 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 NCOA4Q13772 614 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 KCNC3Q14003 757 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 VEPH1Q14D04 833 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 MAPRE1Q15691 268 aaKnown RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 SMAD2Q15796 467 aaKnown RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 UVSSAQ2YD98 709 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 ZNF699Q32M78 642 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 ZNF667Q5HYK9 610 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 CCDC183Q5T5S1 534 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 WSCD1Q658N2 575 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 ANKRD40Q6AI12 368 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 FOXR2Q6PJQ5 311 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 SASS6Q6UVJ0 657 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 CD300LGQ6UXG3 332 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 TMC5Q6UXY8 1006 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 C15orf39Q6ZRI6 1047 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 SPATA31D4Q6ZUB0 917 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 DPH6Q7L8W6 267 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 FAM114A1Q8IWE2 563 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 TOP6BLQ8N6T0 577 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 CMASQ8NFW8 434 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 ZNF461Q8TAF7 563 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 SLC7A14Q8TBB6 771 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 PARD3BQ8TEW8 1205 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 C2orf15Q8WU43 125 aaKnown RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 SMG7Q92540 1137 aaKnown RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 TAF4BQ92750 862 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 MSLNLQ96KJ4 702 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 UHRF1Q96T88 793 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 CLSTN3Q9BQT9 956 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 SNX25Q9H3E2 840 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 MMRN2Q9H8L6 949 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 CYP4F11Q9HBI6 524 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 TMEM8AQ9HCN3 771 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 GDAP2Q9NXN4 497 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 CLEC1BQ9P126 229 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 MAGEC2Q9UBF1 373 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 NXF1Q9UBU9 619 aaKnown RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 AFF4Q9UHB7 1163 aaKnown RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 FBXL5Q9UKA1 691 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 POLIQ9UNA4 740 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 NR2E1Q9Y466 385 aa5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 TIMM13Q9Y5L4 95 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P40-201ENST00000525121 ATP8B3O60423 1300 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 PTPRJQ12913 1337 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 CCDC195A0A1B0GUA6 201 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 WDR27A2RRH5 827 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 TRIM49BA6NDI0 452 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 ZMYND10O75800 440 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 STAU1O95793 577 aaKnown RBP5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 TPM2P07951 284 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 TRIM49P0CI25 452 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 TRIM49CP0CI26 452 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 CCDC192P0DO97 292 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 IL9P15248 144 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 ATF2P15336 505 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 ALDH1A3P47895 512 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 GCLMP48507 274 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 TUFMP49411 452 aaKnown RBP5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 MXI1P50539 228 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 EPHB3P54753 998 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 STX17P56962 302 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 MYL6P60660 151 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms