RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 METTL23Q86XA0 190 aa13.49□□□□□ -0.25
CCNC-216ENST00000523961 FAM186BQ8IYM0 893 aa13.49□□□□□ -0.25
CCNC-216ENST00000523961 C12orf76Q8N812 135 aaPredicted RBP13.49□□□□□ -0.25
CCNC-216ENST00000523961 CMASQ8NFW8 434 aaPredicted RBP13.49□□□□□ -0.25
CCNC-216ENST00000523961 PLEKHO2Q8TD55 490 aa13.49□□□□□ -0.25
CCNC-216ENST00000523961 ADAMTS19Q8TE59 1207 aa13.49□□□□□ -0.25
CCNC-216ENST00000523961 SUSD6Q92537 303 aa13.49□□□□□ -0.25
CCNC-216ENST00000523961 BORCS6Q96GS4 357 aa13.49□□□□□ -0.25
CCNC-216ENST00000523961 MKNK1Q9BUB5 465 aa13.49□□□□□ -0.25
CCNC-216ENST00000523961 APOL5Q9BWW9 433 aa13.49□□□□□ -0.25
CCNC-216ENST00000523961 GZF1Q9H116 711 aaPredicted RBP13.49□□□□□ -0.25
CCNC-216ENST00000523961 FBXW11Q9UKB1 542 aa13.49□□□□□ -0.25
CCNC-216ENST00000523961 SCN1AP35498 2009 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 OR6C75A6NL08 312 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 LRRIQ3A6PVS8 624 aaPredicted RBP13.48□□□□□ -0.25
CCNC-216ENST00000523961 IKBKBO14920 756 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 PHACTR2O75167 634 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 AKAP3O75969 853 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 BMP6P22004 513 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 MTHFRP42898 656 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 VAMP7P51809 220 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 ARPP19P56211 112 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 FKBP3Q00688 224 aaKnown RBP13.48□□□□□ -0.25
CCNC-216ENST00000523961 ROR1Q01973 937 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 ENPEPQ07075 957 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 TRPC3Q13507 836 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 ATAT1Q5SQI0 421 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 LIN9Q5TKA1 542 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 TPGS2Q68CL5 300 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 ANKRD40Q6AI12 368 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 TMC5Q6UXY8 1006 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 CYP26C1Q6V0L0 522 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 RTL10Q7L3V2 364 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 ZNF461Q8TAF7 563 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 ZNF516Q92618 1163 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 HPDLQ96IR7 371 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 RIPOR3Q96MK2 946 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 NECTIN4Q96NY8 510 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 NUP62CLQ9H1M0 184 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 ZDHHC7Q9NXF8 308 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 GDAP2Q9NXN4 497 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 PRKAG3Q9UGI9 489 aa13.48□□□□□ -0.25
CCNC-216ENST00000523961 WDR27A2RRH5 827 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 PPP1R3GB7ZBB8 358 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 HUS1O60921 280 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 ZMYND10O75800 440 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 ABLIM3O94929 683 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 EPB41P11171 864 aaKnown RBP13.47□□□□□ -0.25
CCNC-216ENST00000523961 CPB1P15086 417 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 CD44P16070 742 aaKnown RBP13.47□□□□□ -0.25
CCNC-216ENST00000523961 ELF1P32519 619 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 PMS1P54277 932 aaKnown RBP13.47□□□□□ -0.25
CCNC-216ENST00000523961 BIRC3Q13489 604 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 CBX2Q14781 532 aaPredicted RBP13.47□□□□□ -0.25
CCNC-216ENST00000523961 UVSSAQ2YD98 709 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 WSCD1Q658N2 575 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 SCARA3Q6AZY7 606 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 KLHL10Q6JEL2 608 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 FOXR2Q6PJQ5 311 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 C15orf39Q6ZRI6 1047 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 CCDC149Q6ZUS6 474 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 GPR149Q86SP6 731 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 ZC3H3Q8IXZ2 948 aaKnown RBP13.47□□□□□ -0.25
CCNC-216ENST00000523961 THEM5Q8N1Q8 247 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 SPATA18Q8TC71 538 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 UHRF1Q96T88 793 aaPredicted RBP13.47□□□□□ -0.25
CCNC-216ENST00000523961 RHOBTB2Q9BYZ6 727 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 MAFFQ9ULX9 164 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 SNX9Q9Y5X1 595 aa13.47□□□□□ -0.25
CCNC-216ENST00000523961 PLXNA3P51805 1871 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 CCDC195A0A1B0GUA6 201 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 BICDL2A1A5D9 508 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 TRIM49BA6NDI0 452 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 SLC16A3O15427 465 aaKnown RBP13.46□□□□□ -0.25
CCNC-216ENST00000523961 RFPL2O75678 378 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 PAPLNO95428 1278 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 STAU1O95793 577 aaKnown RBP13.46□□□□□ -0.25
CCNC-216ENST00000523961 CST3P01034 146 aaPredicted RBP13.46□□□□□ -0.25
CCNC-216ENST00000523961 C4BPAP04003 597 aaKnown RBP13.46□□□□□ -0.25
CCNC-216ENST00000523961 C8AP07357 584 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 HNRNPA1P09651 372 aaKnown RBP eCLIP13.46□□□□□ -0.25
CCNC-216ENST00000523961 ATF2P15336 505 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 HOXA9P31269 272 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 ATICP31939 592 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 DLG4P78352 724 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 PPM1LQ5SGD2 360 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 TDRD10Q5VZ19 366 aaKnown RBP13.46□□□□□ -0.25
CCNC-216ENST00000523961 DPH6Q7L8W6 267 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 ADHFE1Q8IWW8 467 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 TMEM86AQ8N2M4 240 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 TOP6BLQ8N6T0 577 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 NELFBQ8WX92 580 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 SYAP1Q96A49 352 aaPredicted RBP13.46□□□□□ -0.25
CCNC-216ENST00000523961 EEF2KMTQ96G04 330 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 PHF7Q9BWX1 381 aaPredicted RBP13.46□□□□□ -0.25
CCNC-216ENST00000523961 PRKD2Q9BZL6 878 aa13.46□□□□□ -0.25
CCNC-216ENST00000523961 AFF4Q9UHB7 1163 aaKnown RBP13.46□□□□□ -0.25
CCNC-216ENST00000523961 TCF20Q9UGU0 1960 aaKnown RBP13.45□□□□□ -0.26
CCNC-216ENST00000523961 MCCD1P59942 119 aaPredicted RBP13.45□□□□□ -0.26
CCNC-216ENST00000523961 MYL6P60660 151 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms