RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 CALML4Q96GE6 196 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 CDK5RAP3Q96JB5 506 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 AK8Q96MA6 479 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 ZNF341Q9BYN7 854 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 DEFB129Q9H1M3 183 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 TMEM60Q9H2L4 133 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 VCPKMTQ9H867 229 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 RMND1Q9NWS8 449 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 SAMD15Q9P1V8 674 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 LRWD1Q9UFC0 647 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 HACL1Q9UJ83 578 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 FEM1BQ9UK73 627 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 MAN1B1Q9UKM7 699 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 SCAF8Q9UPN6 1271 aaKnown RBP7.23□□□□□ -1.25
LINC00534-203ENST00000523406 COQ6Q9Y2Z9 468 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 CTDP1Q9Y5B0 961 aaPredicted RBP7.23□□□□□ -1.25
LINC00534-203ENST00000523406 COL4A3BPQ9Y5P4 624 aa7.23□□□□□ -1.25
LINC00534-203ENST00000523406 AP5Z1O43299 807 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 CTNND1O60716 968 aaKnown RBP7.22□□□□□ -1.25
LINC00534-203ENST00000523406 POU3F3P20264 500 aaPredicted RBP7.22□□□□□ -1.25
LINC00534-203ENST00000523406 CDK11BP21127 795 aaKnown RBP7.22□□□□□ -1.25
LINC00534-203ENST00000523406 CDC25AP30304 524 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 SOX5P35711 763 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 MORC3Q14149 939 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 KARSQ15046 597 aaKnown RBP7.22□□□□□ -1.25
LINC00534-203ENST00000523406 NT5DC1Q5TFE4 455 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 PIK3R6Q5UE93 754 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 FYB2Q5VWT5 728 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 KRT79Q5XKE5 535 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 PPP4R3AQ6IN85 833 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 CCDC174Q6PII3 467 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 USP17L6PQ6QN14 398 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 SARM1Q6SZW1 724 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 OVCH1Q7RTY7 1134 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 IGSF22Q8N9C0 903 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 GSDMAQ96QA5 445 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 PLIN2Q99541 437 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 CCSER1Q9C0I3 900 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 RNF32Q9H0A6 362 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 CUEDC2Q9H467 287 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 EPB41L1Q9H4G0 881 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 MAGEF1Q9HAY2 307 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 TNFRSF12AQ9NP84 129 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 PCDH12Q9NPG4 1184 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 DDX25Q9UHL0 483 aaKnown RBP7.22□□□□□ -1.25
LINC00534-203ENST00000523406 ZNF541Q9H0D2 1346 aa7.22□□□□□ -1.25
LINC00534-203ENST00000523406 CCDC66A2RUB6 948 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 PP2D1A8MPX8 630 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 GCOM1H8Y6P7 765 aaPredicted RBP7.21□□□□□ -1.26
LINC00534-203ENST00000523406 KPNA6O60684 536 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 PLA2G6O60733 806 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 TDP2O95551 362 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 SERPINC1P01008 464 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 POLR2MP0CAP2 368 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 PYGMP11217 842 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 SARSP49591 514 aaKnown RBP7.21□□□□□ -1.26
LINC00534-203ENST00000523406 GALK1P51570 392 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 PDIA5Q14554 519 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 SEPT7Q16181 437 aaKnown RBP7.21□□□□□ -1.26
LINC00534-203ENST00000523406 TPD52L1Q16890 204 aaPredicted RBP7.21□□□□□ -1.26
LINC00534-203ENST00000523406 FAM47CQ5HY64 1035 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 CT47A1Q5JQC4 288 aaPredicted RBP7.21□□□□□ -1.26
LINC00534-203ENST00000523406 PKN3Q6P5Z2 889 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 OTOP3Q7RTS5 596 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 ATG4DQ86TL0 474 aaPredicted RBP7.21□□□□□ -1.26
LINC00534-203ENST00000523406 PLA2G4DQ86XP0 818 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 GPC2Q8N158 579 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 USP33Q8TEY7 942 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 STAMQ92783 540 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 WNK4Q96J92 1243 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 TEPSINQ96N21 525 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 KCNJ15Q99712 375 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 FAM126AQ9BYI3 521 aaPredicted RBP7.21□□□□□ -1.26
LINC00534-203ENST00000523406 ANO3Q9BYT9 981 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 BLZF1Q9H2G9 400 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 PGAP2Q9UHJ9 254 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 CBLCQ9ULV8 474 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 ZKSCAN5Q9Y2L8 839 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 COA3Q9Y2R0 106 aaPredicted RBP7.21□□□□□ -1.26
LINC00534-203ENST00000523406 YBX2Q9Y2T7 364 aaKnown RBP7.21□□□□□ -1.26
LINC00534-203ENST00000523406 MRPL11Q9Y3B7 192 aaKnown RBP7.21□□□□□ -1.26
LINC00534-203ENST00000523406 PSME4Q14997 1843 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 ASTN2O75129 1339 aaPredicted RBP7.21□□□□□ -1.26
LINC00534-203ENST00000523406 MYH4Q9Y623 1939 aa7.21□□□□□ -1.26
LINC00534-203ENST00000523406 ZNF646O15015 1829 aaPredicted RBP7.2□□□□□ -1.26
LINC00534-203ENST00000523406 CBX4O00257 560 aa7.2□□□□□ -1.26
LINC00534-203ENST00000523406 GSTA4O15217 222 aa7.2□□□□□ -1.26
LINC00534-203ENST00000523406 SLC37A4O43826 429 aa7.2□□□□□ -1.26
LINC00534-203ENST00000523406 CFBP00751 764 aa7.2□□□□□ -1.26
LINC00534-203ENST00000523406 NTRK1P04629 796 aa7.2□□□□□ -1.26
LINC00534-203ENST00000523406 RPN1P04843 607 aaKnown RBP7.2□□□□□ -1.26
LINC00534-203ENST00000523406 MYL1P05976 194 aa7.2□□□□□ -1.26
LINC00534-203ENST00000523406 CASP1P29466 404 aa7.2□□□□□ -1.26
LINC00534-203ENST00000523406 DNM2P50570 870 aa7.2□□□□□ -1.26
LINC00534-203ENST00000523406 MECP2P51608 486 aaKnown RBP7.2□□□□□ -1.26
LINC00534-203ENST00000523406 PRELPP51888 382 aa7.2□□□□□ -1.26
LINC00534-203ENST00000523406 USP14P54578 494 aa7.2□□□□□ -1.26
LINC00534-203ENST00000523406 LACTBP83111 547 aaPredicted RBP7.2□□□□□ -1.26
LINC00534-203ENST00000523406 STIM1Q13586 685 aa7.2□□□□□ -1.26
LINC00534-203ENST00000523406 CUL4BQ13620 913 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms