RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 RNF169Q8NCN4 708 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 HELQQ8TDG4 1101 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 NELFBQ8WX92 580 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 CLP1Q92989 425 aaKnown RBP9.06□□□□□ -0.96
VPS13B-210ENST00000521932 SAAL1Q96ER3 474 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 SNX27Q96L92 541 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 MED15Q96RN5 788 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 YME1L1Q96TA2 773 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 GAD1Q99259 594 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 DUSP9Q99956 384 aaKnown RBP9.06□□□□□ -0.96
VPS13B-210ENST00000521932 FAM213AQ9BRX8 229 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 FUCA2Q9BTY2 467 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 MRPL9Q9BYD2 267 aaKnown RBP9.06□□□□□ -0.96
VPS13B-210ENST00000521932 PBX4Q9BYU1 374 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 RPF1Q9H9Y2 349 aaKnown RBP9.06□□□□□ -0.96
VPS13B-210ENST00000521932 ANO10Q9NW15 660 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 MIOSQ9NXC5 875 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 RWDD2AQ9UIY3 292 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 PCDHGC4Q9Y5F7 938 aa9.06□□□□□ -0.96
VPS13B-210ENST00000521932 PTPRSQ13332 1948 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 COL4A6Q14031 1691 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 SMIM28A0A1B0GU29 152 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 DCDC2BA2VCK2 349 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 GOLGA8IPA6NC78 632 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 TRIM49BA6NDI0 452 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 GOLGA8JA6NMD2 632 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 TBKBP1A7MCY6 615 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 LACTBL1A8MY62 500 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 PTGESO14684 152 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 CETN3O15182 167 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 EXOC3O60645 756 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 AKAP3O75969 853 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 IL18RAPO95256 599 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 THP07101 528 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 CXCL8P10145 99 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 HARSP12081 509 aaKnown RBP9.05□□□□□ -0.96
VPS13B-210ENST00000521932 NR2F2P24468 414 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 GATMP50440 423 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 RABGGTBP53611 331 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 TYRO3Q06418 890 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 ENPEPQ07075 957 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 DSC1Q08554 894 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 BTG3Q14201 252 aaPredicted RBP9.05□□□□□ -0.96
VPS13B-210ENST00000521932 STX1AQ16623 288 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 ZSCAN23Q3MJ62 389 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 ARSJQ5FYB0 599 aaPredicted RBP9.05□□□□□ -0.96
VPS13B-210ENST00000521932 KLHL10Q6JEL2 608 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 FILIP1Q7Z7B0 1213 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 NT5DC4Q86YG4 428 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 CBWD2Q8IUF1 395 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 BRSK2Q8IWQ3 736 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 SIX5Q8N196 739 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 URGCPQ8TCY9 931 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 MFSD14AQ96MC6 490 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 ZMAT2Q96NC0 199 aaKnown RBP9.05□□□□□ -0.96
VPS13B-210ENST00000521932 PPP1R10Q96QC0 940 aaKnown RBP9.05□□□□□ -0.96
VPS13B-210ENST00000521932 TSG101Q99816 390 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 MKNK1Q9BUB5 465 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 APOL6Q9BWW8 343 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 TSPAN10Q9H1Z9 355 aaPredicted RBP9.05□□□□□ -0.96
VPS13B-210ENST00000521932 CXCL16Q9H2A7 254 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 CWH43Q9H720 699 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 TBC1D13Q9NVG8 400 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 RBAKQ9NYW8 714 aaPredicted RBP9.05□□□□□ -0.96
VPS13B-210ENST00000521932 KLK14Q9P0G3 267 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 FRMD4BQ9Y2L6 1034 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 YBX2Q9Y2T7 364 aaKnown RBP9.05□□□□□ -0.96
VPS13B-210ENST00000521932 DERAQ9Y315 318 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 C2CD2Q9Y426 696 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 CEP290O15078 2479 aa9.05□□□□□ -0.96
VPS13B-210ENST00000521932 SYCE3A1L190 88 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 LCHNA4D1U4 455 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 LINC01553A4QN01 128 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 ATXN7O15265 892 aaPredicted RBP9.04□□□□□ -0.96
VPS13B-210ENST00000521932 SLC16A3O15427 465 aaKnown RBP9.04□□□□□ -0.96
VPS13B-210ENST00000521932 DDHD2O94830 711 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 POMCP01189 267 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 CCDC192P0DO97 292 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 MYOGP15173 224 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 CYP3A5P20815 502 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 IBSPP21815 317 aaPredicted RBP9.04□□□□□ -0.96
VPS13B-210ENST00000521932 NOS2P35228 1153 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 PSMC2P35998 433 aaKnown RBP9.04□□□□□ -0.96
VPS13B-210ENST00000521932 CASP4P49662 377 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 SCNN1GP51170 649 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 CYP2J2P51589 502 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 TNP2Q05952 138 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 PPP2R3AQ06190 1150 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 GRIK3Q13003 919 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 PSMD6Q15008 389 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 SURF1Q15526 300 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 RAB30Q15771 203 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 ZNF280BQ86YH2 543 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 COLGALT2Q8IYK4 626 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 LRRC43Q8N309 656 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 FIBCD1Q8N539 461 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 TSEN2Q8NCE0 465 aaKnown RBP9.04□□□□□ -0.96
VPS13B-210ENST00000521932 ENOX1Q8TC92 643 aaKnown RBP9.04□□□□□ -0.96
VPS13B-210ENST00000521932 PARD3BQ8TEW8 1205 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 BORCS6Q96GS4 357 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms