RNA–Protein interactions for RNA: ENST00000521162.5

VPS37A-209, Transcript of VPS37A, ESCRT-I subunit, human

TSL 2

Gene VPS37A, Length 818 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS37A-209	ENST00000521162	KTN1	Q86UP2	1357 aa	Known RBP	5	□□□□□ -1.61
VPS37A-209	ENST00000521162	MIA2	Q96PC5	1412 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	EHBP1L1	Q8N3D4	1523 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162		A0A1W2PS29	197 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	MYADML2	A6NDP7	307 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	ERN1	O75460	977 aa	Known RBP	4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	SUN1	O94901	812 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	KHDC1	Q4VXA5	237 aa	Known RBP	4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	FOXR2	Q6PJQ5	311 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	SLC4A10	Q6U841	1118 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	GADL1	Q6ZQY3	521 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	LNX2	Q8N448	690 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	FAM98A	Q8NCA5	519 aa	Known RBP	4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	PDPR	Q8NCN5	879 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	SIMC1	Q8NDZ2	872 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	TMEM125	Q96AQ2	219 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	CRAMP1	Q96RY5	1269 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	HOMER2	Q9NSB8	354 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	KCTD5	Q9NXV2	234 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	ZNHIT2	Q9UHR6	403 aa		4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	TCOF1	Q13428	1488 aa	Known RBP	4.99	□□□□□ -1.61
VPS37A-209	ENST00000521162	PTPRK	Q15262	1439 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	ABCA10	Q8WWZ4	1543 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	KDM5B	Q9UGL1	1544 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	ZAR1L	A6NP61	321 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	KCNA2	P16389	499 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	RECQL	P46063	649 aa	Predicted RBP	4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	SIM1	P81133	766 aa	Predicted RBP	4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	ZNF169	Q14929	603 aa	Predicted RBP	4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	ATP2B3	Q16720	1220 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	TMEM240	Q5SV17	173 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	CATIP	Q7Z7H3	387 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	CFAP52	Q8N1V2	620 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	PRR18	Q8N4B5	295 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	STAG1	Q8WVM7	1258 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	PTCD3	Q96EY7	689 aa	Known RBP	4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	AIFM2	Q9BRQ8	373 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	C1orf43	Q9BWL3	253 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	BRINP2	Q9C0B6	783 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	CASS4	Q9NQ75	786 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	TBCCD1	Q9NVR7	557 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	ROCK1	Q13464	1354 aa		4.98	□□□□□ -1.61
VPS37A-209	ENST00000521162	CC2D2A	Q9P2K1	1620 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	SNAPC4	Q5SXM2	1469 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	PRAMEF33	A0A0G2JMD5	474 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	PRAMEF10	O60809	474 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	PDC	P20941	246 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	LPO	P22079	712 aa	Predicted RBP	4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	GATA3	P23771	443 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	CXCR5	P32302	372 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	SF3B3	Q15393	1217 aa	Known RBP	4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	CD300E	Q496F6	205 aa	Predicted RBP	4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	CCDC93	Q567U6	631 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	SP5	Q6BEB4	398 aa	Predicted RBP	4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	PPP4R3A	Q6IN85	833 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	TTC7B	Q86TV6	843 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	FAM90A1	Q86YD7	464 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	ADGRG5	Q8IZF4	528 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	CPA6	Q8N4T0	437 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	FBXO41	Q8TF61	875 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	LPIN2	Q92539	896 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	GTPBP4	Q9BZE4	634 aa	Known RBP	4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	IMPG2	Q9BZV3	1241 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	RIOX1	Q9H6W3	641 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	AGAP1	Q9UPQ3	857 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	KIF7	Q2M1P5	1343 aa		4.97	□□□□□ -1.61
VPS37A-209	ENST00000521162	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.96	□□□□□ -1.61
VPS37A-209	ENST00000521162	PCSK5	Q92824	1860 aa		4.96	□□□□□ -1.61
VPS37A-209	ENST00000521162	RPRD2	Q5VT52	1461 aa	Known RBP	4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	INSR	P06213	1382 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	TRGV11	A0A075B6L2	103 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	NOG	Q13253	232 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	RALBP1	Q15311	655 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	CCDC184	Q52MB2	194 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	TAPT1	Q6NXT6	567 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	ADGRG3	Q86Y34	549 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	MIER2	Q8N344	545 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	SLC17A8	Q8NDX2	589 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	CHMP4C	Q96CF2	233 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	PDLIM2	Q96JY6	352 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	ETAA1	Q9NY74	926 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	LUC7L2	Q9Y383	392 aa	Known RBP	4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	SPEF1	Q9Y4P9	236 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	PCDHA3	Q9Y5H8	950 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	SPATA31E1	Q6ZUB1	1445 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	CUL7	Q14999	1698 aa		4.96	□□□□□ -1.62
VPS37A-209	ENST00000521162	GRIN2B	Q13224	1484 aa		4.95	□□□□□ -1.62
VPS37A-209	ENST00000521162	BRD4	O60885	1362 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS37A-209	ENST00000521162	ANKRD30B	Q9BXX2	1392 aa		4.95	□□□□□ -1.62
VPS37A-209	ENST00000521162	HECW1	Q76N89	1606 aa		4.95	□□□□□ -1.62
VPS37A-209	ENST00000521162	CCDC195	A0A1B0GUA6	201 aa		4.95	□□□□□ -1.62
VPS37A-209	ENST00000521162	ANKRD62	A6NC57	917 aa		4.95	□□□□□ -1.62
VPS37A-209	ENST00000521162	C1QL1	O75973	258 aa		4.95	□□□□□ -1.62
VPS37A-209	ENST00000521162	MATN4	O95460	622 aa		4.95	□□□□□ -1.62
VPS37A-209	ENST00000521162	POU2F2	P09086	479 aa		4.95	□□□□□ -1.62
VPS37A-209	ENST00000521162	CCND1	P24385	295 aa		4.95	□□□□□ -1.62
VPS37A-209	ENST00000521162	PRDX5	P30044	214 aa		4.95	□□□□□ -1.62
VPS37A-209	ENST00000521162	ANXA11	P50995	505 aa	Known RBP	4.95	□□□□□ -1.62
VPS37A-209	ENST00000521162	NEK2	P51955	445 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms