RNA–Protein interactions for RNA: ENST00000521162.5

VPS37A-209, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 818 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-209ENST00000521162 AEBP2Q6ZN18 517 aaPredicted RBP23.95■■□□□ 1.42
VPS37A-209ENST00000521162 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
VPS37A-209ENST00000521162 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
VPS37A-209ENST00000521162 SENP3Q9H4L4 574 aaPredicted RBP20.2■□□□□ 0.82
VPS37A-209ENST00000521162 FOXD1Q16676 465 aa18.86■□□□□ 0.61
VPS37A-209ENST00000521162 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
VPS37A-209ENST00000521162 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
VPS37A-209ENST00000521162 ADRA2BP18089 450 aa17.97■□□□□ 0.47
VPS37A-209ENST00000521162 PIAS4Q8N2W9 510 aaPredicted RBP17.68■□□□□ 0.42
VPS37A-209ENST00000521162 MSH5O43196 834 aa17.36■□□□□ 0.37
VPS37A-209ENST00000521162 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
VPS37A-209ENST00000521162 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
VPS37A-209ENST00000521162 POTEDQ86YR6 584 aa16.27■□□□□ 0.2
VPS37A-209ENST00000521162 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
VPS37A-209ENST00000521162 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
VPS37A-209ENST00000521162 CNKSR2Q8WXI2 1034 aa15.95■□□□□ 0.14
VPS37A-209ENST00000521162 KCNA4P22459 653 aa15.84■□□□□ 0.13
VPS37A-209ENST00000521162 NCBP3Q53F19 620 aaKnown RBP15.79■□□□□ 0.12
VPS37A-209ENST00000521162 HOXD11P31277 338 aaPredicted RBP15.73■□□□□ 0.11
VPS37A-209ENST00000521162 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
VPS37A-209ENST00000521162 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
VPS37A-209ENST00000521162 DCAF8L1A6NGE4 600 aa15.38■□□□□ 0.05
VPS37A-209ENST00000521162 DNAJC5BQ9UF47 199 aa15.26■□□□□ 0.03
VPS37A-209ENST00000521162 SLC4A1APQ9BWU0 796 aaKnown RBP14.98□□□□□ -0.01
VPS37A-209ENST00000521162 RNF39Q9H2S5 420 aa14.94□□□□□ -0.02
VPS37A-209ENST00000521162 SLC4A2P04920 1241 aa14.93□□□□□ -0.02
VPS37A-209ENST00000521162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.91□□□□□ -0.02
VPS37A-209ENST00000521162 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
VPS37A-209ENST00000521162 C1QBPQ07021 282 aaKnown RBP14.66□□□□□ -0.06
VPS37A-209ENST00000521162 ZBTB22O15209 634 aa14.64□□□□□ -0.07
VPS37A-209ENST00000521162 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
VPS37A-209ENST00000521162 FOXD4L1Q9NU39 408 aa14.57□□□□□ -0.08
VPS37A-209ENST00000521162 MYCNP04198 464 aaPredicted RBP14.46□□□□□ -0.09
VPS37A-209ENST00000521162 SPINK5Q9NQ38 1064 aaPredicted RBP14.41□□□□□ -0.1
VPS37A-209ENST00000521162 EHMT2Q96KQ7 1210 aa14.35□□□□□ -0.11
VPS37A-209ENST00000521162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
VPS37A-209ENST00000521162 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
VPS37A-209ENST00000521162 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
VPS37A-209ENST00000521162 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
VPS37A-209ENST00000521162 CAPN15O75808 1086 aa14.27□□□□□ -0.13
VPS37A-209ENST00000521162 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
VPS37A-209ENST00000521162 APLP2Q06481 763 aa14.18□□□□□ -0.14
VPS37A-209ENST00000521162 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
VPS37A-209ENST00000521162 DSG3P32926 999 aa14.14□□□□□ -0.15
VPS37A-209ENST00000521162 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
VPS37A-209ENST00000521162 ABCB7O75027 752 aa14.05□□□□□ -0.16
VPS37A-209ENST00000521162 ATXN8OSP0DMR3 200 aa14.04□□□□□ -0.16
VPS37A-209ENST00000521162 POLA2Q14181 598 aa13.9□□□□□ -0.18
VPS37A-209ENST00000521162 MKRN4PQ13434 485 aaPredicted RBP13.57□□□□□ -0.24
VPS37A-209ENST00000521162 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
VPS37A-209ENST00000521162 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
VPS37A-209ENST00000521162 FBLN2P98095 1184 aa13.44□□□□□ -0.26
VPS37A-209ENST00000521162 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
VPS37A-209ENST00000521162 SPDYE2BA6NHP3 402 aa13.24□□□□□ -0.29
VPS37A-209ENST00000521162 SPDYE6P0CI01 402 aa13.24□□□□□ -0.29
VPS37A-209ENST00000521162 SPDYE2Q495Y8 402 aa13.24□□□□□ -0.29
VPS37A-209ENST00000521162 AKT1S1Q96B36 256 aa13.21□□□□□ -0.29
VPS37A-209ENST00000521162 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
VPS37A-209ENST00000521162 ZNF692Q9BU19 519 aaPredicted RBP13.15□□□□□ -0.3
VPS37A-209ENST00000521162 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
VPS37A-209ENST00000521162 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
VPS37A-209ENST00000521162 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
VPS37A-209ENST00000521162 PABPN1Q86U42 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
VPS37A-209ENST00000521162 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
VPS37A-209ENST00000521162 FKBP8Q14318 412 aa12.9□□□□□ -0.34
VPS37A-209ENST00000521162 PROM2Q8N271 834 aa12.9□□□□□ -0.34
VPS37A-209ENST00000521162 SPDYE1Q8NFV5 336 aaPredicted RBP12.88□□□□□ -0.35
VPS37A-209ENST00000521162 CLEC11AQ9Y240 323 aa12.84□□□□□ -0.35
VPS37A-209ENST00000521162 POTEHQ6S545 545 aa12.8□□□□□ -0.36
VPS37A-209ENST00000521162 PIP4P2Q8N4L2 257 aa12.8□□□□□ -0.36
VPS37A-209ENST00000521162 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.36
VPS37A-209ENST00000521162 PRR29P0C7W0 189 aa12.68□□□□□ -0.38
VPS37A-209ENST00000521162 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
VPS37A-209ENST00000521162 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
VPS37A-209ENST00000521162 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
VPS37A-209ENST00000521162 CREBZFQ9NS37 354 aa12.58□□□□□ -0.4
VPS37A-209ENST00000521162 MNX1P50219 401 aaPredicted RBP12.45□□□□□ -0.42
VPS37A-209ENST00000521162 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
VPS37A-209ENST00000521162 EVX2Q03828 476 aa12.39□□□□□ -0.43
VPS37A-209ENST00000521162 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
VPS37A-209ENST00000521162 C19orf67A6NJJ6 358 aa12.36□□□□□ -0.43
VPS37A-209ENST00000521162 HAX1O00165 279 aa12.36□□□□□ -0.43
VPS37A-209ENST00000521162 MIER1Q8N108 512 aa12.35□□□□□ -0.43
VPS37A-209ENST00000521162 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
VPS37A-209ENST00000521162 PLCD3Q8N3E9 789 aa12.31□□□□□ -0.44
VPS37A-209ENST00000521162 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
VPS37A-209ENST00000521162 NPM1P06748 294 aaKnown RBP eCLIP12.22□□□□□ -0.45
VPS37A-209ENST00000521162 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
VPS37A-209ENST00000521162 SP7Q8TDD2 431 aaPredicted RBP12.21□□□□□ -0.45
VPS37A-209ENST00000521162 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
VPS37A-209ENST00000521162 NUBP1P53384 320 aa12.17□□□□□ -0.46
VPS37A-209ENST00000521162 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
VPS37A-209ENST00000521162 ZRANB1Q9UGI0 708 aa12.14□□□□□ -0.47
VPS37A-209ENST00000521162 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
VPS37A-209ENST00000521162 ZNF579Q8NAF0 562 aaKnown RBP12.11□□□□□ -0.47
VPS37A-209ENST00000521162 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
VPS37A-209ENST00000521162 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
VPS37A-209ENST00000521162 PHF12Q96QT6 1004 aa12.08□□□□□ -0.48
VPS37A-209ENST00000521162 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
VPS37A-209ENST00000521162 GABBR2O75899 941 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms