RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 CTXN3Q4LDR2 81 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 INTS8Q75QN2 995 aaKnown RBP17.55■□□□□ 0.4
TNPO1-212ENST00000520850 LIMS2Q7Z4I7 341 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 ZC3H3Q8IXZ2 948 aaKnown RBP17.55■□□□□ 0.4
TNPO1-212ENST00000520850 TMEM86AQ8N2M4 240 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 OR5B17Q8NGF7 314 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 NOC3LQ8WTT2 800 aaKnown RBP17.55■□□□□ 0.4
TNPO1-212ENST00000520850 UHRF1Q96T88 793 aaPredicted RBP17.55■□□□□ 0.4
TNPO1-212ENST00000520850 PHF7Q9BWX1 381 aaPredicted RBP17.55■□□□□ 0.4
TNPO1-212ENST00000520850 MTMR12Q9C0I1 747 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 LMBRD1Q9NUN5 540 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 KIAA1468Q9P260 1216 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 HSFX1Q9UBD0 423 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 MAN1B1Q9UKM7 699 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 MAPK8IP1Q9UQF2 711 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 R3HCC1Q9Y3T6 440 aaKnown RBP17.55■□□□□ 0.4
TNPO1-212ENST00000520850 CYB561D2O14569 222 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 DLATP10515 647 aaKnown RBP17.54■□□□□ 0.4
TNPO1-212ENST00000520850 ATICP31939 592 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 PSMC2P35998 433 aaKnown RBP17.54■□□□□ 0.4
TNPO1-212ENST00000520850 FKBP3Q00688 224 aaKnown RBP17.54■□□□□ 0.4
TNPO1-212ENST00000520850 ROR1Q01973 937 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 ZP2Q05996 745 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 SMARCB1Q12824 385 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 GPR17Q13304 367 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 CLUL1Q15846 466 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 OVOS1Q6IE37 1185 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 CCDC149Q6ZUS6 474 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 METTL23Q86XA0 190 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 TCEAL8Q8IYN2 117 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 TMEM130Q8N3G9 435 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 TOP6BLQ8N6T0 577 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 ZNF516Q92618 1163 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 PRKD2Q9BZL6 878 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 VRTNQ9H8Y1 702 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 USTQ9Y2C2 406 aa17.54■□□□□ 0.4
TNPO1-212ENST00000520850 PTPRJQ12913 1337 aa17.53■□□□□ 0.4
TNPO1-212ENST00000520850 PLXNA3P51805 1871 aa17.53■□□□□ 0.4
TNPO1-212ENST00000520850 CCDC195A0A1B0GUA6 201 aa17.53■□□□□ 0.4
TNPO1-212ENST00000520850 CETN3O15182 167 aa17.53■□□□□ 0.4
TNPO1-212ENST00000520850 C4BPAP04003 597 aaKnown RBP17.53■□□□□ 0.4
TNPO1-212ENST00000520850 CCNE1P24864 410 aa17.53■□□□□ 0.4
TNPO1-212ENST00000520850 CASP4P49662 377 aa17.53■□□□□ 0.4
TNPO1-212ENST00000520850 THEM5Q8N1Q8 247 aa17.53■□□□□ 0.4
TNPO1-212ENST00000520850 CCDC127Q96BQ5 260 aa17.53■□□□□ 0.4
TNPO1-212ENST00000520850 TSG101Q99816 390 aa17.53■□□□□ 0.4
TNPO1-212ENST00000520850 AFF4Q9UHB7 1163 aaKnown RBP17.53■□□□□ 0.4
TNPO1-212ENST00000520850 TCF20Q9UGU0 1960 aaKnown RBP17.53■□□□□ 0.4
TNPO1-212ENST00000520850 MUC3AQ02505 3323 aa17.52■□□□□ 0.4
TNPO1-212ENST00000520850 WDR27A2RRH5 827 aa17.52■□□□□ 0.4
TNPO1-212ENST00000520850 LOC730098B7Z3J9 87 aa17.52■□□□□ 0.4
TNPO1-212ENST00000520850 GOLGA6L22H0YM25 854 aa17.52■□□□□ 0.4
TNPO1-212ENST00000520850 PSMA7O14818 248 aa17.52■□□□□ 0.4
TNPO1-212ENST00000520850 HUS1O60921 280 aa17.52■□□□□ 0.4
TNPO1-212ENST00000520850 AKAP3O75969 853 aa17.52■□□□□ 0.4
TNPO1-212ENST00000520850 CST3P01034 146 aaPredicted RBP17.52■□□□□ 0.4
TNPO1-212ENST00000520850 GTF2H1P32780 548 aa17.52■□□□□ 0.4
TNPO1-212ENST00000520850 RARS2Q5T160 578 aaKnown RBP17.52■□□□□ 0.4
TNPO1-212ENST00000520850 LIN9Q5TKA1 542 aa17.52■□□□□ 0.4
TNPO1-212ENST00000520850 CEP135Q66GS9 1140 aa17.52■□□□□ 0.4
TNPO1-212ENST00000520850 SMYD4Q8IYR2 804 aaPredicted RBP17.52■□□□□ 0.4
TNPO1-212ENST00000520850 C12orf76Q8N812 135 aaPredicted RBP17.52■□□□□ 0.4
TNPO1-212ENST00000520850 PLEKHO2Q8TD55 490 aa17.52■□□□□ 0.4
TNPO1-212ENST00000520850 ERCC4Q92889 916 aaPredicted RBP17.52■□□□□ 0.4
TNPO1-212ENST00000520850 ZNF707Q96C28 371 aaPredicted RBP17.52■□□□□ 0.4
TNPO1-212ENST00000520850 HPDLQ96IR7 371 aa17.52■□□□□ 0.4
TNPO1-212ENST00000520850 TIMM13Q9Y5L4 95 aaPredicted RBP17.52■□□□□ 0.4
TNPO1-212ENST00000520850 C5orf42Q9H799 3197 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 LRRIQ3A6PVS8 624 aaPredicted RBP17.51■□□□□ 0.39
TNPO1-212ENST00000520850 PPP1R3GB7ZBB8 358 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 GABRDO14764 452 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 C8AP07357 584 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 KRT19P08727 400 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 SPATA31D3P0C874 917 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 BMP6P22004 513 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 LHX1P48742 406 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 VAMP7P51809 220 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 ZACNQ401N2 412 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 ANKRD40Q6AI12 368 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 TMC5Q6UXY8 1006 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 SPATA31D4Q6ZUB0 917 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 GLYCTKQ8IVS8 523 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 GJD3Q8N144 294 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 C2orf15Q8WU43 125 aaKnown RBP17.51■□□□□ 0.39
TNPO1-212ENST00000520850 ACBD6Q9BR61 282 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 WDR6Q9NNW5 1121 aaKnown RBP17.51■□□□□ 0.39
TNPO1-212ENST00000520850 NR2E1Q9Y466 385 aa17.51■□□□□ 0.39
TNPO1-212ENST00000520850 BICDL2A1A5D9 508 aa17.5■□□□□ 0.39
TNPO1-212ENST00000520850 SPDYE4A6NLX3 237 aa17.5■□□□□ 0.39
TNPO1-212ENST00000520850 DLL1O00548 723 aa17.5■□□□□ 0.39
TNPO1-212ENST00000520850 SLC16A3O15427 465 aaKnown RBP17.5■□□□□ 0.39
TNPO1-212ENST00000520850 RFPL2O75678 378 aa17.5■□□□□ 0.39
TNPO1-212ENST00000520850 KRT13P13646 458 aa17.5■□□□□ 0.39
TNPO1-212ENST00000520850 ELF1P32519 619 aa17.5■□□□□ 0.39
TNPO1-212ENST00000520850 PPM1LQ5SGD2 360 aa17.5■□□□□ 0.39
TNPO1-212ENST00000520850 WSCD1Q658N2 575 aa17.5■□□□□ 0.39
TNPO1-212ENST00000520850 LMBRD2Q68DH5 695 aaPredicted RBP17.5■□□□□ 0.39
TNPO1-212ENST00000520850 FAM186BQ8IYM0 893 aa17.5■□□□□ 0.39
TNPO1-212ENST00000520850 PDCL2Q8N4E4 241 aa17.5■□□□□ 0.39
TNPO1-212ENST00000520850 TAF4BQ92750 862 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms