RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 CDT1Q9H211 546 aa27.33■■□□□ 1.97
COL13A1-213ENST00000520267 SSR1P43307 286 aaKnown RBP27.33■■□□□ 1.97
COL13A1-213ENST00000520267 ASPAP45381 313 aa27.33■■□□□ 1.97
COL13A1-213ENST00000520267 ARMCX2Q7L311 632 aa27.33■■□□□ 1.97
COL13A1-213ENST00000520267 ANKS1BQ7Z6G8 1248 aa27.33■■□□□ 1.97
COL13A1-213ENST00000520267 KATNAL2Q8IYT4 538 aa27.33■■□□□ 1.97
COL13A1-213ENST00000520267 TFAP2BQ92481 460 aa27.33■■□□□ 1.97
COL13A1-213ENST00000520267 ASB14A6NK59 587 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 B4GALT4O60513 344 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 CAND2O75155 1236 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 C22orf31O95567 290 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 MAGOHP61326 146 aaKnown RBP27.32■■□□□ 1.96
COL13A1-213ENST00000520267 KLF1Q13351 362 aaPredicted RBP27.32■■□□□ 1.96
COL13A1-213ENST00000520267 ARMC9Q7Z3E5 817 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 TP73O15350 636 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 TNNC2P02585 160 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 FGFR4P22455 802 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 ARHGAP1Q07960 439 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 PTGISQ16647 500 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 ODF2Q5BJF6 829 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 TMEM130Q8N3G9 435 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 SHCBP1Q8NEM2 672 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 ZC3H15Q8WU90 426 aaKnown RBP27.32■■□□□ 1.96
COL13A1-213ENST00000520267 ANKRD36BP1Q96IX9 119 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 ERAP1Q9NZ08 941 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 SLC12A6Q9UHW9 1150 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 POLIQ9UNA4 740 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 TNFSF13BQ9Y275 285 aa27.32■■□□□ 1.96
COL13A1-213ENST00000520267 TCRBV5S1A1TA0A578 114 aa27.31■■□□□ 1.96
COL13A1-213ENST00000520267 CXCL8P10145 99 aa27.31■■□□□ 1.96
COL13A1-213ENST00000520267 MAN1A1P33908 653 aa27.31■■□□□ 1.96
COL13A1-213ENST00000520267 PPP2R2AP63151 447 aa27.31■■□□□ 1.96
COL13A1-213ENST00000520267 CALCOCO2Q13137 446 aa27.31■■□□□ 1.96
COL13A1-213ENST00000520267 WDTC1Q8N5D0 677 aa27.31■■□□□ 1.96
COL13A1-213ENST00000520267 IP6K2Q9UHH9 426 aa27.31■■□□□ 1.96
COL13A1-213ENST00000520267 PLXNA1Q9UIW2 1896 aa27.31■■□□□ 1.96
COL13A1-213ENST00000520267 TMEM191CA6NGB0 347 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 CSDE1O75534 798 aaKnown RBP27.3■■□□□ 1.96
COL13A1-213ENST00000520267 LSM8O95777 96 aaKnown RBP27.3■■□□□ 1.96
COL13A1-213ENST00000520267 TCF4P15884 667 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 EPN3Q9H201 632 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 WHRNQ9P202 907 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 ASIC3Q9UHC3 531 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 GPR25O00155 361 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 ASAP2O43150 1006 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 CALB1P05937 261 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 INSRRP14616 1297 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 ZNF252P-AS1Q0IIN9 211 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 SNAPC2Q13487 334 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 TRIP13Q15645 432 aaPredicted RBP27.3■■□□□ 1.96
COL13A1-213ENST00000520267 ATP13A4Q4VNC1 1196 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 TMEM35BQ8NCS4 154 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 UHMK1Q8TAS1 419 aaKnown RBP27.3■■□□□ 1.96
COL13A1-213ENST00000520267 TLCD1Q96CP7 247 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 FAM118BQ9BPY3 351 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 OSBPL8Q9BZF1 889 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 IFT122Q9HBG6 1241 aa27.3■■□□□ 1.96
COL13A1-213ENST00000520267 LOC102724159A0A0B4J2E5 919 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 TULP2O00295 520 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 RARGP13631 454 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 PTK6Q13882 451 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 SLMAPQ14BN4 828 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 PWP2Q15269 919 aaKnown RBP27.29■■□□□ 1.96
COL13A1-213ENST00000520267 TAPT1Q6NXT6 567 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 HOOK3Q86VS8 718 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 EXD1Q8NHP7 514 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 UPF1Q92900 1129 aaKnown RBP eCLIP27.29■■□□□ 1.96
COL13A1-213ENST00000520267 L3MBTL3Q96JM7 780 aaPredicted RBP27.29■■□□□ 1.96
COL13A1-213ENST00000520267 PPP1R16BQ96T49 567 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 FAM129AQ9BZQ8 928 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 RPF1Q9H9Y2 349 aaKnown RBP27.29■■□□□ 1.96
COL13A1-213ENST00000520267 KLHL11Q9NVR0 708 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 NXF1Q9UBU9 619 aaKnown RBP27.29■■□□□ 1.96
COL13A1-213ENST00000520267 NDUFAB1O14561 156 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 IVDP26440 423 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 TMOD1P28289 359 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 LDLRAD1Q5T700 205 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 DPY19L2Q6NUT2 758 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 CCDC114Q96M63 670 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 MCEEQ96PE7 176 aa27.29■■□□□ 1.96
COL13A1-213ENST00000520267 RIPK2O43353 540 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 LGALS2P05162 132 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 KRT19P08727 400 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 RAP1GAPP47736 663 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 SEC24CP53992 1094 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 SYDE1Q6ZW31 735 aaPredicted RBP27.28■■□□□ 1.96
COL13A1-213ENST00000520267 CCDC25Q86WR0 208 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 ATL2Q8NHH9 583 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 PCDHGC3Q9UN70 934 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 ZSWIM8A7E2V4 1837 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 MEFVO15553 781 aaPredicted RBP27.28■■□□□ 1.96
COL13A1-213ENST00000520267 OGDHQ02218 1023 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 ZNF484Q5JVG2 852 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 DNAJC24Q6P3W2 148 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 RHBDF2Q6PJF5 856 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 MAMDC4Q6UXC1 1216 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 GRK7Q8WTQ7 553 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 ZNF518BQ9C0D4 1074 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 AAASQ9NRG9 546 aa27.28■■□□□ 1.96
COL13A1-213ENST00000520267 SIX4Q9UIU6 781 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms