RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 ITGB3BPQ13352 177 aaPredicted RBP4.94□□□□□ -1.62
PABPC1-212ENST00000519622 TUBB2AQ13885 445 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 BRD3Q15059 726 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 USH1GQ495M9 461 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 NBPF12Q5TAG4 269 aaPredicted RBP4.94□□□□□ -1.62
PABPC1-212ENST00000519622 KLHDC7AQ5VTJ3 777 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 RINT1Q6NUQ1 792 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 IRF2BP2Q7Z5L9 587 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 FAM83AQ86UY5 434 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 FAM114A1Q8IWE2 563 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 NELFCDQ8IXH7 590 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 SPICE1Q8N0Z3 855 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 POU5F2Q8N7G0 328 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 MNS1Q8NEH6 495 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 LMO3Q8TAP4 145 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 PLEKHO2Q8TD55 490 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 COG1Q8WTW3 980 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 UBXN4Q92575 508 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 SYN2Q92777 582 aaPredicted RBP4.94□□□□□ -1.62
PABPC1-212ENST00000519622 SLC35C1Q96A29 364 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 IQCDQ96DY2 449 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 COX4I2Q96KJ9 171 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 FAM20AQ96MK3 541 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 NAP1L4Q99733 375 aaKnown RBP4.94□□□□□ -1.62
PABPC1-212ENST00000519622 TUBB2BQ9BVA1 445 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 LSM14BQ9BX40 385 aaKnown RBP4.94□□□□□ -1.62
PABPC1-212ENST00000519622 PACSIN1Q9BY11 444 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 TMEM39BQ9GZU3 492 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 MKRN2Q9H000 416 aaKnown RBP4.94□□□□□ -1.62
PABPC1-212ENST00000519622 NT5C3AQ9H0P0 336 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 GLT8D2Q9H1C3 349 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 UNC45AQ9H3U1 944 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 ZSWIM4Q9H7M6 989 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 PLCB1Q9NQ66 1216 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 ZNF277Q9NRM2 450 aaPredicted RBP4.94□□□□□ -1.62
PABPC1-212ENST00000519622 OLFML3Q9NRN5 406 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 FAM207AQ9NSI2 230 aaPredicted RBP4.94□□□□□ -1.62
PABPC1-212ENST00000519622 SMARCAL1Q9NZC9 954 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 EHD2Q9NZN4 543 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 AIPL1Q9NZN9 384 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 CEP72Q9P209 647 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 MYO6Q9UM54 1294 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 GUCA1BQ9UMX6 200 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 SNX12Q9UMY4 172 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 PCDHB10Q9UN67 800 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 PCDHA13Q9Y5I0 950 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 ST14Q9Y5Y6 855 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 MYH10P35580 1976 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 MYH11P35749 1972 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 PFASO15067 1338 aa4.94□□□□□ -1.62
PABPC1-212ENST00000519622 TMEM265A0A087WTH1 108 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 A0A087X0T9 212 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 SHISA3A0PJX4 238 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 GRID2IPA4D2P6 1211 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 LRRIQ3A6PVS8 624 aaPredicted RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 BTNL10A8MVZ5 291 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 WASH4PA8MWX3 477 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 AGPSO00116 658 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 NFIBO00712 420 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 WNT10BO00744 389 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 PDXKO00764 312 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 SLC16A3O15427 465 aaKnown RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 NCK2O43639 380 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 N4BP1O75113 896 aaKnown RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 PRPF6O94906 941 aaKnown RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 MOCS3O95396 460 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 FOSP01100 380 aaPredicted RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 TP53P04637 393 aaPredicted RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 FAM228BP0C875 321 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 TRIM21P19474 475 aaKnown RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 SLC9A1P19634 815 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 PON1P27169 355 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 CLCN7P51798 805 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 RNF4P78317 190 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 MRPS9P82933 396 aaKnown RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 ITIH3Q06033 890 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 GFPT1Q06210 699 aaPredicted RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 CXCL9Q07325 125 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 BMS1Q14692 1282 aaKnown RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 COG2Q14746 738 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 UGCGQ16739 394 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 KNOP1Q1ED39 458 aaKnown RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 NBPF9Q3BBW0 867 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 MUM1L1Q5H9M0 696 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 CCDC122Q5T0U0 273 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 HAUS3Q68CZ6 603 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 MCTP2Q6DN12 878 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 ZNF571Q7Z3V5 609 aaPredicted RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 DNAAF5Q86Y56 855 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 CCDC65Q8IXS2 484 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 MMGT1Q8N4V1 131 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 CEP112Q8N8E3 955 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 C19orf47Q8N9M1 422 aaKnown RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 LRRC57Q8N9N7 239 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 SUPT20HQ8NEM7 779 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 ANKRD20A12PQ8NF67 263 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 RASSF8Q8NHQ8 419 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 SLC30A5Q8TAD4 765 aa4.93□□□□□ -1.62
PABPC1-212ENST00000519622 LNX1Q8TBB1 728 aaPredicted RBP4.93□□□□□ -1.62
PABPC1-212ENST00000519622 AENQ8WTP8 325 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms