RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 LRMPQ12912 555 aa15.15■□□□□ 0.02
SDC2-203ENST00000519587 CUL2Q13617 745 aa15.15■□□□□ 0.02
SDC2-203ENST00000519587 PPP2R2DQ66LE6 453 aa15.15■□□□□ 0.02
SDC2-203ENST00000519587 SPECC1LQ69YQ0 1117 aa15.15■□□□□ 0.02
SDC2-203ENST00000519587 SCARA5Q6ZMJ2 495 aa15.15■□□□□ 0.02
SDC2-203ENST00000519587 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.15■□□□□ 0.02
SDC2-203ENST00000519587 DPH6Q7L8W6 267 aa15.15■□□□□ 0.02
SDC2-203ENST00000519587 METTL23Q86XA0 190 aa15.15■□□□□ 0.02
SDC2-203ENST00000519587 FMNL3Q8IVF7 1028 aa15.15■□□□□ 0.02
SDC2-203ENST00000519587 TMEM130Q8N3G9 435 aa15.15■□□□□ 0.02
SDC2-203ENST00000519587 JAKMIP2Q96AA8 810 aa15.15■□□□□ 0.02
SDC2-203ENST00000519587 PBX4Q9BYU1 374 aa15.15■□□□□ 0.02
SDC2-203ENST00000519587 SLC28A3Q9HAS3 691 aa15.15■□□□□ 0.02
SDC2-203ENST00000519587 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.15■□□□□ 0.02
SDC2-203ENST00000519587 PCDHB8Q9UN66 801 aa15.15■□□□□ 0.02
SDC2-203ENST00000519587 LAMA2P24043 3122 aaKnown RBP15.15■□□□□ 0.02
SDC2-203ENST00000519587 TTC28Q96AY4 2481 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 NT5C1B-RDH14C9J2C7 533 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 M0QZQ0 153 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 SPTLC1O15269 473 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 FGF18O76093 207 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 ITGB1P05556 798 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 RB1P06400 928 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 TYMPP19971 482 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 DNAJB2P25686 324 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 CDC25BP30305 580 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 PBX1P40424 430 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 ASPAP45381 313 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 KCNMA1Q12791 1236 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 BMS1Q14692 1282 aaKnown RBP15.14■□□□□ 0.01
SDC2-203ENST00000519587 TIGD5Q53EQ6 642 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 KLHDC7AQ5VTJ3 777 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 SPOPLQ6IQ16 392 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 PDXDC1Q6P996 788 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 CACNA2D4Q7Z3S7 1137 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 VSTM4Q8IW00 320 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 ADGRF2Q8IZF7 708 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 CDX2Q99626 313 aaPredicted RBP15.14■□□□□ 0.01
SDC2-203ENST00000519587 BCO2Q9BYV7 579 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 NKX2-4Q9H2Z4 354 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 SNX25Q9H3E2 840 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 APOBEC3GQ9HC16 384 aaKnown RBP15.14■□□□□ 0.01
SDC2-203ENST00000519587 CEP72Q9P209 647 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 PUF60Q9UHX1 559 aaKnown RBP15.14■□□□□ 0.01
SDC2-203ENST00000519587 FBXL5Q9UKA1 691 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 YBX2Q9Y2T7 364 aaKnown RBP15.14■□□□□ 0.01
SDC2-203ENST00000519587 PLXNA4Q9HCM2 1894 aa15.14■□□□□ 0.01
SDC2-203ENST00000519587 C5orf67F2Z3F1 127 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 F8W810 466 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 TACC1O75410 805 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 ADCY5O95622 1261 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 FAM163BP0C2L3 166 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 LINC00271P0C7V0 271 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 MYOGP15173 224 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 UCHL3P15374 230 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 BRCC3P46736 316 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 POLR2FP61218 127 aaKnown RBP15.13■□□□□ 0.01
SDC2-203ENST00000519587 ERVK-21P61565 698 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 PLCB3Q01970 1234 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 TAP1Q03518 808 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 UBE3AQ05086 875 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 RAPGEF1Q13905 1077 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 FIGNQ5HY92 759 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 FAM171A1Q5VUB5 890 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 KIAA1841Q6NSI8 718 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.13■□□□□ 0.01
SDC2-203ENST00000519587 DDX53Q86TM3 631 aaKnown RBP15.13■□□□□ 0.01
SDC2-203ENST00000519587 PPFIBP1Q86W92 1011 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 DRC7Q8IY82 874 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 FBXO22Q8NEZ5 403 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 ZNF397Q8NF99 534 aaPredicted RBP15.13■□□□□ 0.01
SDC2-203ENST00000519587 TIFAQ96CG3 184 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 SPAG5Q96R06 1193 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 HERC2P3Q9BVR0 1158 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 EDEM3Q9BZQ6 932 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 GANQ9H2C0 597 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 SMYD3Q9H7B4 428 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 SIX2Q9NPC8 291 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 UBE2TQ9NPD8 197 aaPredicted RBP15.13■□□□□ 0.01
SDC2-203ENST00000519587 POLIQ9UNA4 740 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 LZTS1Q9Y250 596 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 VWA8A3KMH1 1905 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 PRUNE2Q8WUY3 3088 aa15.13■□□□□ 0.01
SDC2-203ENST00000519587 I3L4J1 428 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 AP5Z1O43299 807 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 SOD2P04179 222 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 CYP11A1P05108 521 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 URODP06132 367 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 PBX2P40425 430 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 LHX1P48742 406 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 KLK7P49862 253 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 CREMQ03060 361 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 YWHAHQ04917 246 aaPredicted RBP15.12■□□□□ 0.01
SDC2-203ENST00000519587 USP41Q3LFD5 358 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 OVOS1Q6IE37 1185 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 PHLDB3Q6NSJ2 640 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 RRAGAQ7L523 313 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 TMEM173Q86WV6 379 aaPredicted RBP15.12■□□□□ 0.01
SDC2-203ENST00000519587 ARHGEF19Q8IW93 802 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 PDCL2Q8N4E4 241 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms